Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVUA0080
Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/5-30 mM) |
|---|---|---|---|---|---|
| remove | |||||
| 105,370 | + | -0.6 | |||
| 105,399 | + | -0.1 | |||
| 105,429 | + | -0.9 | |||
| 105,686 | - | cysC | DVUA0079 | 0.15 | +0.5 |
| 105,958 | + | cysC | DVUA0079 | 0.55 | -0.4 |
| 105,974 | - | cysC | DVUA0079 | 0.57 | -0.3 |
| 105,976 | + | cysC | DVUA0079 | 0.57 | -0.5 |
| 106,076 | - | cysC | DVUA0079 | 0.72 | -0.0 |
| 106,173 | + | cysC | DVUA0079 | 0.86 | -0.5 |
| 106,202 | + | -0.7 | |||
| 106,202 | + | +0.0 | |||
| 106,367 | + | +1.0 | |||
| 106,439 | + | -0.2 | |||
| 106,575 | + | DVUA0080 | 0.24 | +0.2 | |
| 106,593 | - | DVUA0080 | 0.26 | -0.9 | |
| 106,620 | - | DVUA0080 | 0.29 | -1.1 | |
| 106,622 | + | DVUA0080 | 0.29 | -0.5 | |
| 107,110 | + | DVUA0080 | 0.84 | -3.2 | |
| 107,334 | + | +0.1 | |||
| 107,342 | - | +1.4 | |||
| 107,362 | + | -0.6 | |||
| 107,448 | - | +0.4 | |||
| 107,736 | + | DVUA0081 | 0.23 | -0.6 | |
| 107,851 | + | DVUA0081 | 0.29 | -0.6 | |
| 108,049 | + | DVUA0081 | 0.38 | -1.6 |
Or see this region's nucleotide sequence