Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3225

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
3,393,942	+				+1.6
3,393,968	-				-0.2
3,394,022	+				-0.3
3,394,070	+				-0.4
3,394,078	-				-0.4
3,394,085	-				-0.1
3,394,097	-				-0.2
3,394,148	+				+0.2
3,394,174	+				-0.7
3,394,199	+	sfsA	DVU3224	0.10	-0.2
3,394,264	-	sfsA	DVU3224	0.19	+0.1
3,394,373	+	sfsA	DVU3224	0.34	-1.7
3,394,384	-	sfsA	DVU3224	0.35	-1.2
3,394,387	-	sfsA	DVU3224	0.36	-0.6
3,394,450	+	sfsA	DVU3224	0.44	+1.1
3,394,450	+	sfsA	DVU3224	0.44	-0.7
3,394,548	+	sfsA	DVU3224	0.58	-0.1
3,394,549	-	sfsA	DVU3224	0.58	-0.1
3,394,671	+	sfsA	DVU3224	0.75	-0.1
3,394,679	-	sfsA	DVU3224	0.76	+0.3
3,394,701	-	sfsA	DVU3224	0.79	-0.2
3,394,744	-	sfsA	DVU3224	0.85	+0.9
3,394,749	-	sfsA	DVU3224	0.85	-0.3
3,394,754	-	sfsA	DVU3224	0.86	-0.4
3,394,811	+				-0.0
3,394,819	-				-0.6
3,394,850	+				-0.6
3,394,890	+				-0.4
3,394,929	-				-0.7
3,394,931	-				-1.3
3,394,985	+		DVU3225	0.22	-0.0
3,395,023	-		DVU3225	0.30	+0.9
3,395,058	+		DVU3225	0.39	+1.0
3,395,109	-		DVU3225	0.51	+0.3
3,395,248	-		DVU3225	0.84	+0.7
3,395,332	-				-1.1
3,395,373	+		DVU3226	0.14	+0.6
3,395,405	-		DVU3226	0.24	-0.4
3,395,450	+		DVU3226	0.37	-0.3
3,395,587	-		DVU3226	0.79	+0.1
3,395,676	-				+0.7
3,395,676	-				+0.4
3,395,862	-		DVU3227	0.30	+0.2
3,395,937	-		DVU3227	0.41	+0.7
3,395,967	-		DVU3227	0.45	+0.4
3,396,004	+		DVU3227	0.51	+0.4
3,396,010	+		DVU3227	0.51	+0.7
3,396,012	+		DVU3227	0.52	+1.2
3,396,018	-		DVU3227	0.53	+0.8
3,396,077	-		DVU3227	0.61	+1.3
3,396,106	+		DVU3227	0.65	+0.9
3,396,134	-		DVU3227	0.70	+0.4
3,396,304	+				+1.0
3,396,310	+				+0.4
3,396,312	-				+1.0