Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3223

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
3,392,734	-				+0.1
3,392,748	+				-0.1
3,392,748	-				-0.0
3,392,756	-				+1.2
3,392,888	+	aspB	DVU3223	0.17	+0.9
3,392,926	-	aspB	DVU3223	0.20	+0.3
3,392,956	+	aspB	DVU3223	0.23	+0.3
3,392,964	-	aspB	DVU3223	0.24	-0.2
3,393,101	+	aspB	DVU3223	0.35	+0.1
3,393,146	+	aspB	DVU3223	0.39	+0.2
3,393,218	-	aspB	DVU3223	0.45	+0.7
3,393,290	+	aspB	DVU3223	0.51	-0.2
3,393,292	+	aspB	DVU3223	0.52	-0.2
3,393,330	+	aspB	DVU3223	0.55	+0.1
3,393,338	-	aspB	DVU3223	0.55	-0.1
3,393,472	+	aspB	DVU3223	0.67	+1.4
3,393,477	+	aspB	DVU3223	0.67	-0.3
3,393,480	-	aspB	DVU3223	0.68	+1.8
3,393,485	-	aspB	DVU3223	0.68	+0.5
3,393,486	+	aspB	DVU3223	0.68	-0.1
3,393,506	+	aspB	DVU3223	0.70	+0.2
3,393,524	+	aspB	DVU3223	0.71	+0.5
3,393,530	-	aspB	DVU3223	0.72	+0.3
3,393,530	-	aspB	DVU3223	0.72	-0.2
3,393,543	+	aspB	DVU3223	0.73	-0.0
3,393,553	-	aspB	DVU3223	0.74	+1.9
3,393,596	+	aspB	DVU3223	0.77	-0.5
3,393,606	+	aspB	DVU3223	0.78	-0.6
3,393,676	-	aspB	DVU3223	0.84	-0.1
3,393,707	-	aspB	DVU3223	0.87	+0.5
3,393,711	+	aspB	DVU3223	0.87	-0.1
3,393,779	+				+0.2
3,393,787	-				-0.1
3,393,843	-				-0.2
3,393,862	-				+0.7
3,393,875	+				+0.2
3,393,942	+				+1.6
3,393,968	-				-0.2
3,394,022	+				-0.3
3,394,070	+				-0.4
3,394,078	-				-0.4
3,394,085	-				-0.1
3,394,097	-				-0.2
3,394,148	+				+0.2
3,394,174	+				-0.7
3,394,199	+	sfsA	DVU3224	0.10	-0.2
3,394,264	-	sfsA	DVU3224	0.19	+0.1
3,394,373	+	sfsA	DVU3224	0.34	-1.7
3,394,384	-	sfsA	DVU3224	0.35	-1.2
3,394,387	-	sfsA	DVU3224	0.36	-0.6
3,394,450	+	sfsA	DVU3224	0.44	+1.1
3,394,450	+	sfsA	DVU3224	0.44	-0.7
3,394,548	+	sfsA	DVU3224	0.58	-0.1
3,394,549	-	sfsA	DVU3224	0.58	-0.1
3,394,671	+	sfsA	DVU3224	0.75	-0.1
3,394,679	-	sfsA	DVU3224	0.76	+0.3
3,394,701	-	sfsA	DVU3224	0.79	-0.2
3,394,744	-	sfsA	DVU3224	0.85	+0.9
3,394,749	-	sfsA	DVU3224	0.85	-0.3
3,394,754	-	sfsA	DVU3224	0.86	-0.4
3,394,811	+				-0.0
3,394,819	-				-0.6
3,394,850	+				-0.6