Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU3087

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
3,228,215	-	cobB-2	DVU3086	0.50	-0.8
3,228,238	+	cobB-2	DVU3086	0.51	-0.0
3,228,246	-	cobB-2	DVU3086	0.51	-0.6
3,228,246	-	cobB-2	DVU3086	0.51	+1.9
3,228,283	-	cobB-2	DVU3086	0.53	-0.3
3,228,285	+	cobB-2	DVU3086	0.53	-0.8
3,228,300	-	cobB-2	DVU3086	0.54	-1.5
3,228,300	-	cobB-2	DVU3086	0.54	-1.4
3,228,486	-	cobB-2	DVU3086	0.64	-0.4
3,228,523	-	cobB-2	DVU3086	0.66	-0.6
3,228,563	+	cobB-2	DVU3086	0.69	-0.3
3,228,571	-	cobB-2	DVU3086	0.69	-1.9
3,228,580	+	cobB-2	DVU3086	0.70	-0.4
3,228,618	+	cobB-2	DVU3086	0.72	-0.5
3,228,634	+	cobB-2	DVU3086	0.72	+0.2
3,228,650	-	cobB-2	DVU3086	0.73	+0.5
3,228,706	+	cobB-2	DVU3086	0.76	-0.0
3,228,804	+	cobB-2	DVU3086	0.82	+0.4
3,228,876	-	cobB-2	DVU3086	0.86	-0.1
3,228,910	-	cobB-2	DVU3086	0.88	-1.0
3,228,910	-	cobB-2	DVU3086	0.88	-1.5
3,228,910	-	cobB-2	DVU3086	0.88	+1.5
3,228,910	-	cobB-2	DVU3086	0.88	-0.8
3,228,918	+	cobB-2	DVU3086	0.88	-0.8
3,228,921	+	cobB-2	DVU3086	0.88	-0.5
3,228,983	+				-1.2
3,228,991	-				-0.7
3,229,020	+				+0.5
3,229,020	+				-1.0
3,229,020	+				-1.3
3,229,104	-				-0.7
3,229,118	+				-0.7
3,229,128	+				-0.3
3,229,153	+				-0.4
3,229,276	-	cobH	DVU3087	0.21	+0.4
3,229,281	-	cobH	DVU3087	0.21	-0.4
3,229,281	-	cobH	DVU3087	0.21	-0.7
3,229,281	-	cobH	DVU3087	0.21	-0.2
3,229,312	+	cobH	DVU3087	0.26	-2.0
3,229,312	+	cobH	DVU3087	0.26	-1.8
3,229,408	-	cobH	DVU3087	0.41	-1.0
3,229,423	+	cobH	DVU3087	0.43	-0.6
3,229,489	+	cobH	DVU3087	0.54	-0.8
3,229,579	-	cobH	DVU3087	0.68	-1.0
3,229,604	-	cobH	DVU3087	0.72	-0.7
3,229,610	+	cobH	DVU3087	0.73	-2.3
3,229,613	-	cobH	DVU3087	0.73	-1.1
3,229,618	-	cobH	DVU3087	0.74	-1.4
3,229,647	-	cobH	DVU3087	0.78	-0.7
3,229,691	+	cobH	DVU3087	0.85	+0.5
3,229,691	+	cobH	DVU3087	0.85	-0.9
3,229,694	-	cobH	DVU3087	0.86	-1.1
3,229,852	+				-0.8
3,229,859	-				-1.6
3,229,898	+				-0.4
3,229,966	+				-0.4
3,230,011	-				-1.2
3,230,044	+				+0.1
3,230,059	+				+0.2
3,230,092	+	deaD	DVU3088	0.11	+0.4
3,230,093	-	deaD	DVU3088	0.11	-0.3
3,230,097	+	deaD	DVU3088	0.12	+0.0
3,230,100	-	deaD	DVU3088	0.12	-0.3
3,230,136	-	deaD	DVU3088	0.14	-0.1
3,230,175	-	deaD	DVU3088	0.16	-0.0
3,230,178	+	deaD	DVU3088	0.16	+0.1
3,230,197	+	deaD	DVU3088	0.17	+0.1
3,230,308	+	deaD	DVU3088	0.24	+0.0
3,230,337	+	deaD	DVU3088	0.26	-0.7
3,230,349	+	deaD	DVU3088	0.26	-0.5
3,230,406	+	deaD	DVU3088	0.30	-0.5
3,230,421	+	deaD	DVU3088	0.30	-0.5
3,230,448	+	deaD	DVU3088	0.32	-0.3
3,230,462	+	deaD	DVU3088	0.33	+0.1
3,230,566	+	deaD	DVU3088	0.39	-0.2
3,230,567	+	deaD	DVU3088	0.39	-1.7
3,230,682	+	deaD	DVU3088	0.45	-0.4
3,230,689	+	deaD	DVU3088	0.46	+0.9
3,230,747	-	deaD	DVU3088	0.49	-1.1