Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2960

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
3,066,423	+				-0.2
3,066,423	+				+0.2
3,066,878	+				-0.7
3,066,898	-				+0.1
3,066,927	+				-0.4
3,066,937	+				+0.4
3,066,937	+				-0.4
3,066,937	+				-0.1
3,066,992	-				-0.2
3,067,060	-				-0.9
3,067,067	+				-1.2
3,067,085	-				-1.0
3,067,180	-	ntrC	DVU2960	0.16	-0.8
3,067,180	-	ntrC	DVU2960	0.16	-1.9
3,067,180	-	ntrC	DVU2960	0.16	+0.6
3,067,180	-	ntrC	DVU2960	0.16	-1.2
3,067,180	-	ntrC	DVU2960	0.16	-0.7
3,067,190	+	ntrC	DVU2960	0.16	-1.1
3,067,190	+	ntrC	DVU2960	0.16	-0.9
3,067,190	+	ntrC	DVU2960	0.16	-1.6
3,067,291	+	ntrC	DVU2960	0.23	-0.5
3,067,299	-	ntrC	DVU2960	0.24	-1.9
3,067,349	+	ntrC	DVU2960	0.27	-1.1
3,067,397	-	ntrC	DVU2960	0.31	-0.8
3,067,438	-	ntrC	DVU2960	0.34	-0.3
3,067,449	+	ntrC	DVU2960	0.34	+0.3
3,067,449	+	ntrC	DVU2960	0.34	-0.8
3,067,452	-	ntrC	DVU2960	0.35	-0.5
3,067,466	+	ntrC	DVU2960	0.36	-0.7
3,067,466	+	ntrC	DVU2960	0.36	-1.1
3,067,467	-	ntrC	DVU2960	0.36	-1.3
3,067,516	+	ntrC	DVU2960	0.39	-1.5
3,067,562	+	ntrC	DVU2960	0.42	-0.8
3,067,570	-	ntrC	DVU2960	0.43	-0.7
3,067,580	+	ntrC	DVU2960	0.44	-0.1
3,067,583	-	ntrC	DVU2960	0.44	-0.1
3,067,643	-	ntrC	DVU2960	0.48	-0.6
3,067,655	+	ntrC	DVU2960	0.49	-0.8
3,067,673	-	ntrC	DVU2960	0.50	+0.4
3,067,673	-	ntrC	DVU2960	0.50	-0.8
3,067,673	-	ntrC	DVU2960	0.50	-0.9
3,067,679	+	ntrC	DVU2960	0.51	-0.5
3,067,698	-	ntrC	DVU2960	0.52	-0.8
3,067,754	-	ntrC	DVU2960	0.56	-1.3
3,067,761	-	ntrC	DVU2960	0.56	-0.4
3,067,779	+	ntrC	DVU2960	0.58	-0.5
3,067,787	-	ntrC	DVU2960	0.58	-0.1
3,067,804	-	ntrC	DVU2960	0.59	-1.3
3,067,811	+	ntrC	DVU2960	0.60	-0.6
3,067,841	+	ntrC	DVU2960	0.62	-0.6
3,067,873	-	ntrC	DVU2960	0.64	-0.5
3,067,893	-	ntrC	DVU2960	0.66	-0.9
3,067,948	+	ntrC	DVU2960	0.69	-3.3
3,067,975	-	ntrC	DVU2960	0.71	+0.7
3,067,975	-	ntrC	DVU2960	0.71	-0.8
3,068,013	-	ntrC	DVU2960	0.74	-1.0
3,068,077	+	ntrC	DVU2960	0.79	-0.3
3,068,109	+	ntrC	DVU2960	0.81	-0.8
3,068,109	+	ntrC	DVU2960	0.81	-0.6
3,068,117	-	ntrC	DVU2960	0.81	-1.6
3,068,154	+	ntrC	DVU2960	0.84	-1.6
3,068,205	+	ntrC	DVU2960	0.88	-0.1
3,068,213	-	ntrC	DVU2960	0.88	-1.0
3,068,315	-				-0.8
3,068,367	+				-0.4
3,068,376	+				-0.0
3,068,400	+				-1.0
3,068,436	+		DVU2961	0.14	-0.7
3,068,442	-		DVU2961	0.16	-0.9
3,068,492	-		DVU2961	0.30	-0.7
3,068,624	+		DVU2961	0.68	-0.9
3,068,632	-		DVU2961	0.71	-0.7
3,068,701	+				-0.8
3,068,701	+				-0.2
3,068,728	-				-1.0
3,068,782	+				-1.3
3,068,835	-				-0.0
3,068,835	-				-0.4
3,068,895	-				+1.2
3,068,956	-		DVU2962	0.13	+0.3
3,069,006	-		DVU2962	0.16	+0.8
3,069,025	-		DVU2962	0.17	-0.4
3,069,067	+		DVU2962	0.19	-1.1
3,069,112	-		DVU2962	0.22	-0.0
3,069,170	+		DVU2962	0.25	+0.4
3,069,206	+		DVU2962	0.27	-0.1
3,069,214	-		DVU2962	0.28	+0.7
3,069,224	-		DVU2962	0.28	-0.5
3,069,224	-		DVU2962	0.28	+0.5
3,069,320	+		DVU2962	0.34	-0.7