Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2847

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,948,530	-		DVU2844	0.80	-0.2
2,948,548	+		DVU2844	0.82	-0.1
2,948,589	+		DVU2844	0.87	-0.4
2,948,600	+		DVU2844	0.88	-0.9
2,948,666	+				-0.1
2,948,739	+				+0.3
2,948,749	+				+1.3
2,948,749	+				-0.1
2,948,751	+	hit	DVU2845	0.10	-0.2
2,948,838	-	hit	DVU2845	0.31	-0.2
2,948,855	-	hit	DVU2845	0.34	-0.7
2,948,872	-	hit	DVU2845	0.38	+0.3
2,948,939	-	hit	DVU2845	0.54	-0.1
2,948,952	-	hit	DVU2845	0.57	-0.4
2,949,065	-	hit	DVU2845	0.83	+0.4
2,949,093	+				+0.5
2,949,093	+				+1.4
2,949,149	+				-0.5
2,949,157	-				-0.2
2,949,157	-				-0.1
2,949,157	-				-0.4
2,949,193	+		DVU2846	0.30	+0.0
2,949,329	-				-0.2
2,949,404	+				+0.2
2,949,412	+				-1.5
2,949,437	+				-0.2
2,949,440	-				-0.5
2,949,484	-		DVU2847	0.13	+0.9
2,949,794	+				-0.5
2,949,794	+				+1.1
2,949,893	-		DVU2848	0.21	+0.0
2,949,893	-		DVU2848	0.21	+0.8
2,949,982	+		DVU2848	0.37	-0.6
2,950,045	+		DVU2848	0.49	-0.1
2,950,053	-		DVU2848	0.50	-0.3
2,950,089	-		DVU2848	0.57	+0.1
2,950,089	-		DVU2848	0.57	-0.1
2,950,089	-		DVU2848	0.57	+0.1
2,950,106	-		DVU2848	0.60	-1.1
2,950,106	-		DVU2848	0.60	-0.2
2,950,106	-		DVU2848	0.60	+0.1
2,950,172	+		DVU2848	0.72	-0.7
2,950,172	+		DVU2848	0.72	-0.0
2,950,386	+				+0.1
2,950,414	-	stfE	DVU2849	0.10	-0.4
2,950,414	-	stfE	DVU2849	0.10	-0.3
2,950,512	-	stfE	DVU2849	0.22	+0.3
2,950,522	-	stfE	DVU2849	0.23	-0.1
2,950,522	-	stfE	DVU2849	0.23	-1.3
2,950,640	-	stfE	DVU2849	0.38	-0.3
2,950,701	+	stfE	DVU2849	0.45	+1.0
2,950,702	-	stfE	DVU2849	0.45	-0.6
2,950,724	+	stfE	DVU2849	0.48	+0.6
2,950,729	+	stfE	DVU2849	0.49	-0.5
2,950,759	+	stfE	DVU2849	0.52	-0.2