Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2791

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,892,912	-		DVU2789	0.33	-0.3
2,892,965	+		DVU2789	0.43	-0.6
2,893,012	+		DVU2789	0.51	-0.7
2,893,015	-		DVU2789	0.52	+1.5
2,893,030	-		DVU2789	0.55	-0.1
2,893,057	+		DVU2789	0.60	+0.3
2,893,057	+		DVU2789	0.60	+0.5
2,893,066	+		DVU2789	0.61	-0.6
2,893,074	-		DVU2789	0.63	-0.2
2,893,074	-		DVU2789	0.63	-0.2
2,893,081	-		DVU2789	0.64	+0.2
2,893,088	-		DVU2789	0.65	-0.5
2,893,114	+		DVU2789	0.70	-0.4
2,893,238	-				-0.4
2,893,265	+				-0.6
2,893,302	-				+0.0
2,893,314	-				-0.2
2,893,381	+				-0.3
2,893,381	+				-0.3
2,893,387	-				+0.7
2,893,412	+				+0.6
2,893,420	-				-0.0
2,893,446	-				-0.6
2,893,461	+				+0.2
2,893,461	+				-0.2
2,893,469	-				+0.1
2,893,469	-				-0.7
2,893,469	-				-0.1
2,893,470	+				-0.4
2,893,476	-				-0.2
2,893,478	-				-0.2
2,893,542	+				-0.1
2,893,561	-				-0.5
2,893,725	-		DVU2790	0.45	+0.6
2,893,846	-				+0.1
2,893,871	+				-1.3
2,894,021	+	dhcA	DVU2791	0.22	-1.2
2,894,023	+	dhcA	DVU2791	0.22	+0.5
2,894,029	-	dhcA	DVU2791	0.23	-1.3
2,894,048	-	dhcA	DVU2791	0.25	-1.5
2,894,153	-	dhcA	DVU2791	0.39	-0.3
2,894,221	+	dhcA	DVU2791	0.47	-0.5
2,894,223	+	dhcA	DVU2791	0.48	+0.4
2,894,240	+	dhcA	DVU2791	0.50	-2.5
2,894,243	-	dhcA	DVU2791	0.50	-3.1
2,894,243	-	dhcA	DVU2791	0.50	-1.4
2,894,286	-	dhcA	DVU2791	0.56	-1.0
2,894,286	-	dhcA	DVU2791	0.56	-1.4
2,894,296	-	dhcA	DVU2791	0.57	+0.3
2,894,321	-	dhcA	DVU2791	0.60	-1.1
2,894,352	-	dhcA	DVU2791	0.64	-0.4
2,894,372	-	dhcA	DVU2791	0.67	+1.0
2,894,391	+	dhcA	DVU2791	0.69	-0.6
2,894,391	+	dhcA	DVU2791	0.69	-0.6
2,894,391	+	dhcA	DVU2791	0.69	-0.8
2,894,392	+	dhcA	DVU2791	0.69	-1.2
2,894,400	-	dhcA	DVU2791	0.70	-1.0
2,894,475	-	dhcA	DVU2791	0.80	-1.4
2,894,564	-				-1.4
2,894,632	+				+0.3
2,894,655	-				+1.2
2,894,728	-				-1.1
2,894,759	-				-0.9
2,894,765	-				-2.0
2,894,804	+		DVU2792	0.13	+0.1
2,894,832	-		DVU2792	0.16	-1.2
2,894,973	-		DVU2792	0.27	-1.9
2,895,013	-		DVU2792	0.31	-1.2
2,895,029	-		DVU2792	0.32	-1.1
2,895,341	+		DVU2792	0.58	-1.8
2,895,377	+		DVU2792	0.61	-0.6
2,895,385	-		DVU2792	0.61	-0.7
2,895,438	+		DVU2792	0.66	-1.0
2,895,621	+		DVU2792	0.81	-0.7