Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2614
Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/5-30 mM) |
---|---|---|---|---|---|
remove | |||||
2,731,519 | - | DVU2612 | 0.32 | -1.0 | |
2,731,533 | + | DVU2612 | 0.35 | -1.6 | |
2,731,710 | - | DVU2612 | 0.81 | -0.9 | |
2,731,822 | - | -0.9 | |||
2,732,463 | + | -0.2 | |||
2,732,471 | - | +2.1 | |||
2,732,506 | - | -0.7 | |||
2,733,061 | + | -0.4 | |||
2,733,085 | + | -0.3 | |||
2,733,085 | + | -1.9 | |||
2,733,085 | + | -0.3 | |||
2,733,085 | + | +0.2 | |||
2,733,085 | + | -0.4 | |||
2,733,093 | - | -1.0 | |||
2,733,093 | - | +0.0 | |||
2,733,093 | - | -0.8 | |||
2,733,098 | + | -0.0 | |||
2,733,129 | + | -0.3 | |||
2,733,147 | + | -0.1 | |||
2,733,185 | + | -0.7 | |||
2,733,207 | + | -0.5 | |||
2,733,220 | + | -0.5 | |||
2,733,260 | + | -0.9 | |||
2,733,260 | + | -0.6 | |||
2,733,260 | + | +0.1 | |||
2,733,357 | + | -0.1 | |||
2,733,408 | + | -0.1 | |||
2,733,418 | + | +0.4 | |||
2,733,555 | - | -0.1 | |||
2,733,562 | + | -0.2 | |||
2,733,580 | + | +0.0 | |||
2,733,592 | + | +0.6 | |||
2,733,666 | + | +0.7 | |||
2,733,791 | + | DVU2615 | 0.12 | -0.4 | |
2,733,844 | + | DVU2615 | 0.18 | +0.3 | |
2,733,855 | + | DVU2615 | 0.19 | -1.9 | |
2,733,855 | + | DVU2615 | 0.19 | +0.1 | |
2,733,863 | - | DVU2615 | 0.20 | -0.4 | |
2,733,957 | - | DVU2615 | 0.31 | -0.2 | |
2,733,957 | - | DVU2615 | 0.31 | -0.1 | |
2,734,008 | - | DVU2615 | 0.37 | +0.5 |
Or see this region's nucleotide sequence