Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2611

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,728,416	+		DVU2609	0.86	+0.6
2,728,510	+				+0.0
2,728,518	-				-0.1
2,728,527	-				-0.0
2,728,557	-				-0.1
2,728,583	+				+0.4
2,728,620	+		DVU2610	0.10	+0.5
2,728,711	+		DVU2610	0.24	-1.1
2,728,719	-		DVU2610	0.25	+0.4
2,728,732	+		DVU2610	0.27	-0.2
2,728,734	-		DVU2610	0.27	-0.3
2,728,790	+		DVU2610	0.35	-0.0
2,728,790	+		DVU2610	0.35	+0.2
2,728,853	+		DVU2610	0.45	-0.5
2,728,861	-		DVU2610	0.46	-0.0
2,728,874	+		DVU2610	0.48	-0.8
2,728,923	+		DVU2610	0.55	-0.2
2,728,923	+		DVU2610	0.55	+0.1
2,728,931	-		DVU2610	0.56	-0.1
2,728,998	-		DVU2610	0.66	-0.4
2,729,016	+		DVU2610	0.69	+0.0
2,729,073	-		DVU2610	0.77	-0.2
2,729,103	+		DVU2610	0.82	-0.1
2,729,144	-		DVU2610	0.88	+0.5
2,729,158	-		DVU2610	0.90	+0.8
2,729,355	-				-0.2
2,729,381	-				-0.4
2,729,391	-				-1.1
2,729,530	-		DVU2611	0.15	-0.3
2,729,558	+		DVU2611	0.16	+0.2
2,729,625	+		DVU2611	0.21	-1.1
2,729,625	+		DVU2611	0.21	-0.2
2,729,633	-		DVU2611	0.21	+0.9
2,729,633	-		DVU2611	0.21	+1.3
2,729,633	-		DVU2611	0.21	-0.2
2,729,633	-		DVU2611	0.21	+0.2
2,729,692	+		DVU2611	0.25	+0.6
2,729,710	+		DVU2611	0.26	+2.2
2,729,741	+		DVU2611	0.28	-0.1
2,729,749	-		DVU2611	0.29	-0.3
2,729,778	-		DVU2611	0.31	+0.2
2,729,830	-		DVU2611	0.34	-0.2
2,729,838	-		DVU2611	0.34	-0.1
2,729,866	+		DVU2611	0.36	+0.8
2,729,901	-		DVU2611	0.38	-0.1
2,729,910	+		DVU2611	0.39	-0.7
2,729,922	+		DVU2611	0.40	-0.2
2,729,930	-		DVU2611	0.40	-0.6
2,729,970	+		DVU2611	0.43	-0.1
2,729,980	-		DVU2611	0.44	+0.7
2,730,081	+		DVU2611	0.50	-1.2
2,730,146	-		DVU2611	0.54	-0.1
2,730,209	+		DVU2611	0.58	+0.8
2,730,245	+		DVU2611	0.61	-0.4
2,730,290	-		DVU2611	0.63	-0.4
2,730,354	-		DVU2611	0.68	-1.0
2,730,367	+		DVU2611	0.68	+0.1
2,730,368	+		DVU2611	0.68	-0.3
2,730,412	+		DVU2611	0.71	-0.2
2,730,452	+		DVU2611	0.74	-0.0
2,730,473	+		DVU2611	0.75	-0.2
2,730,481	-		DVU2611	0.76	-0.7
2,730,519	-		DVU2611	0.78	-0.2
2,730,613	+		DVU2611	0.84	-0.9
2,730,621	-		DVU2611	0.85	-0.5
2,730,651	+		DVU2611	0.87	+1.1
2,730,651	+		DVU2611	0.87	-0.1
2,730,746	-				-0.2
2,730,752	+				-1.2
2,730,779	+				+0.1
2,730,784	+				-0.3
2,730,790	+				+1.7
2,730,816	-				-0.7
2,730,833	+				-0.4
2,730,880	+				-0.8
2,730,899	+				-0.8
2,730,899	+				+0.1
2,730,952	+				-0.2
2,730,952	+				+0.8
2,730,960	-				-0.3
2,730,960	-				-0.1
2,730,967	+				-0.0
2,730,989	-				-0.0
2,731,009	-				-0.2
2,731,033	+				-0.2
2,731,049	+				-0.2
2,731,155	-				-0.3
2,731,311	-				+0.1
2,731,376	+				+0.8
2,731,417	-				-0.3
2,731,417	-				-1.2
2,731,463	+		DVU2612	0.17	-0.7
2,731,519	-		DVU2612	0.32	-1.0
2,731,533	+		DVU2612	0.35	-1.6
2,731,710	-		DVU2612	0.81	-0.9
2,731,822	-				-0.9