Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2600

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,720,232	+		DVU2598	0.32	+0.1
2,720,321	-		DVU2598	0.48	-0.7
2,720,326	-		DVU2598	0.49	-0.1
2,720,383	+		DVU2598	0.59	-0.5
2,720,384	-		DVU2598	0.59	-0.4
2,720,420	+		DVU2598	0.66	+0.4
2,720,420	+		DVU2598	0.66	-0.5
2,720,428	-		DVU2598	0.67	+0.1
2,720,428	-		DVU2598	0.67	-3.2
2,720,515	+		DVU2598	0.83	-1.3
2,720,523	-		DVU2598	0.85	-0.3
2,720,558	-				+0.3
2,720,568	-				+1.2
2,720,570	+				-0.0
2,720,578	-				+0.4
2,720,610	+				-0.7
2,720,611	+				-0.1
2,720,693	+		DVU2599	0.21	+0.6
2,720,708	+		DVU2599	0.25	+0.1
2,720,717	+		DVU2599	0.27	+0.2
2,720,741	+		DVU2599	0.32	-0.3
2,720,749	-		DVU2599	0.34	-0.1
2,720,766	-		DVU2599	0.38	+0.2
2,720,847	+		DVU2599	0.56	-0.4
2,720,860	-		DVU2599	0.59	+0.2
2,720,934	-		DVU2599	0.76	-0.3
2,720,941	+		DVU2599	0.77	-0.1
2,721,026	+				-0.5
2,721,026	+				-0.2
2,721,026	+				-0.1
2,721,026	+				-0.8
2,721,034	-				+1.3
2,721,034	-				-0.9
2,721,034	-				+0.2
2,721,034	-				-0.2
2,721,085	-				-2.0
2,721,131	-				-0.7
2,721,134	+				-0.9
2,721,147	-				-0.4
2,721,163	+				+0.9
2,721,171	-				+0.3
2,721,171	-				+0.2
2,721,171	-				-0.6
2,721,195	+				-0.9
2,721,196	-				-0.4
2,721,208	+				+0.3
2,721,231	+		DVU2600	0.12	+0.5
2,721,351	-		DVU2600	0.42	-0.2
2,721,379	+		DVU2600	0.49	-0.5
2,721,462	+		DVU2600	0.70	+0.6
2,721,503	+		DVU2600	0.80	+0.2
2,721,503	+		DVU2600	0.80	+0.9
2,721,610	+				-1.6
2,721,618	-				-0.5
2,721,618	-				-0.2
2,721,618	-				-0.0
2,721,618	-				+0.8
2,721,618	-				-0.2
2,721,620	+				+0.4
2,721,646	+				-0.7
2,721,672	-				+0.0
2,721,699	+				-0.9
2,721,816	+		DORF19137	0.23	+0.1
2,721,934	+		DORF19137	0.35	-0.6
2,721,943	+		DORF19137	0.36	-0.5
2,721,943	+		DORF19137	0.36	+0.2
2,721,968	+		DORF19137	0.39	-0.9
2,722,000	+		DORF19137	0.43	-0.2
2,722,025	-		DORF19137	0.45	+0.0
2,722,039	-		DORF19137	0.47	-0.3
2,722,039	-		DORF19137	0.47	-0.3
2,722,039	-		DORF19137	0.47	+0.0
2,722,041	-		DORF19137	0.47	-0.0
2,722,151	-		DORF19137	0.59	+0.1
2,722,200	-		DORF19137	0.64	-0.5
2,722,207	-		DORF19137	0.65	-0.6
2,722,207	-		DORF19137	0.65	-0.1
2,722,293	+		DORF19137	0.75	+0.0
2,722,306	-		DORF19137	0.76	+0.1
2,722,320	+		DORF19137	0.78	-0.2
2,722,342	+		DORF19137	0.80	+0.0
2,722,342	+		DORF19137	0.80	-0.3
2,722,409	-		DORF19137	0.87	-0.2
2,722,514	+				+0.4
2,722,575	+				+1.1