Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2566

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,677,957	+				-1.1
2,678,031	+	bioD	DVU2565	0.16	-0.4
2,678,031	+	bioD	DVU2565	0.16	+0.0
2,678,036	+	bioD	DVU2565	0.16	+0.6
2,678,039	-	bioD	DVU2565	0.17	-0.2
2,678,052	+	bioD	DVU2565	0.18	+1.2
2,678,060	-	bioD	DVU2565	0.20	-0.8
2,678,060	-	bioD	DVU2565	0.20	+1.1
2,678,266	-	bioD	DVU2565	0.47	-0.0
2,678,288	-	bioD	DVU2565	0.50	-0.2
2,678,298	-	bioD	DVU2565	0.52	-0.3
2,678,365	+	bioD	DVU2565	0.61	-1.3
2,678,373	+	bioD	DVU2565	0.62	+1.2
2,678,403	-	bioD	DVU2565	0.66	-0.2
2,678,474	-	bioD	DVU2565	0.75	-0.8
2,678,493	+	bioD	DVU2565	0.78	-0.1
2,678,508	-	bioD	DVU2565	0.80	+0.2
2,678,549	+	bioD	DVU2565	0.86	+0.3
2,678,616	-				-0.2
2,678,659	+				+0.4
2,678,659	+				-0.4
2,678,660	-				-0.3
2,678,667	-				+0.5
2,678,667	-				+0.4
2,678,667	-				-0.1
2,678,667	-				-0.4
2,678,693	-				-0.8
2,678,724	+				-0.7
2,678,757	+				-0.6
2,678,794	+				-0.9
2,679,679	+	lysA-2	DVU2566	0.69	+1.9
2,679,687	-	lysA-2	DVU2566	0.69	-0.7
2,679,735	+	lysA-2	DVU2566	0.73	-0.4
2,679,743	-	lysA-2	DVU2566	0.74	-0.1
2,679,832	+	lysA-2	DVU2566	0.81	+0.1
2,679,862	+	lysA-2	DVU2566	0.83	-1.7
2,679,862	+	lysA-2	DVU2566	0.83	+0.2
2,679,992	-				-2.1
2,679,993	+				+0.4
2,680,074	-				+0.0
2,680,126	+				-0.1
2,680,143	+				-0.2
2,680,223	+	lysX	DVU2567	0.21	+0.6
2,680,563	-	lysX	DVU2567	0.69	+0.3
2,680,606	-	lysX	DVU2567	0.75	-0.2
2,680,697	+	lysX	DVU2567	0.88	+0.3
2,680,698	+	lysX	DVU2567	0.88	+1.2
2,680,719	+				-0.1
2,680,794	+				-0.8
2,680,795	-				+1.1
2,680,838	+				-0.1
2,680,849	+				-0.1
2,680,870	+				-0.4
2,680,880	+				+0.7
2,680,880	+				+0.6
2,680,880	+				-0.4
2,680,880	+				+0.1
2,680,888	-				+0.1