Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2553

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,665,125	-				-0.3
2,665,187	+				+0.2
2,665,248	-				-0.4
2,665,266	+	nifU-3	DVU2553	0.17	+0.8
2,665,272	-	nifU-3	DVU2553	0.20	+1.1
2,665,288	-	nifU-3	DVU2553	0.26	-0.4
2,665,321	+	nifU-3	DVU2553	0.39	-0.6
2,665,369	+	nifU-3	DVU2553	0.59	+0.9
2,665,495	-				-0.1
2,665,497	+				+0.8
2,665,536	+				+0.2
2,665,543	-				-0.5
2,665,567	-				-0.1
2,665,567	-				-0.7
2,665,618	+				+0.2
2,665,626	-				-0.4
2,665,629	+				-1.7
2,665,631	+				-0.1
2,665,637	-				+0.9
2,665,696	+		DVU2554	0.14	-0.7
2,665,704	-		DVU2554	0.15	+0.6
2,665,815	-		DVU2554	0.27	+1.5
2,665,826	+		DVU2554	0.29	+0.3
2,665,986	-		DVU2554	0.47	-0.5
2,666,019	-		DVU2554	0.51	+0.6
2,666,065	+		DVU2554	0.56	+0.5
2,666,073	-		DVU2554	0.57	-0.8
2,666,073	-		DVU2554	0.57	+0.2
2,666,280	+		DVU2554	0.80	-0.6
2,666,285	+		DVU2554	0.81	-0.4
2,666,290	+		DVU2554	0.81	-0.5
2,666,351	+		DVU2554	0.88	-0.8
2,666,399	+				+0.3
2,666,433	-				-0.6