Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2290
Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/5-30 mM) |
---|---|---|---|---|---|
remove | |||||
2,382,243 | - | DVU2288 | 0.49 | +0.5 | |
2,382,750 | - | b2488 | DVU2289 | 0.44 | +0.5 |
2,382,926 | + | b2488 | DVU2289 | 0.72 | +0.5 |
2,383,041 | + | +0.5 | |||
2,383,041 | + | -0.0 | |||
2,383,041 | + | +0.2 | |||
2,383,116 | + | -0.6 | |||
2,383,243 | + | DVU2290 | 0.26 | -0.5 | |
2,383,365 | + | DVU2290 | 0.49 | +1.0 | |
2,383,639 | + | -0.3 | |||
2,383,775 | + | DVU2291 | 0.12 | +0.9 | |
2,383,819 | - | DVU2291 | 0.16 | -0.8 | |
2,384,062 | + | DVU2291 | 0.38 | +1.4 | |
2,384,276 | - | DVU2291 | 0.58 | +0.9 | |
2,384,352 | + | DVU2291 | 0.64 | -0.6 | |
2,384,556 | + | DVU2291 | 0.83 | -0.8 |
Or see this region's nucleotide sequence