Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2112

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,206,398	+				-0.2
2,206,476	-				-0.4
2,206,557	-		DVU2111	0.11	-1.7
2,206,698	+		DVU2111	0.27	-0.1
2,206,739	-		DVU2111	0.32	+0.0
2,206,742	-		DVU2111	0.32	-0.3
2,206,785	+		DVU2111	0.37	+0.5
2,206,808	-		DVU2111	0.39	-0.4
2,206,917	-		DVU2111	0.51	+0.1
2,206,917	-		DVU2111	0.51	-0.5
2,206,932	-		DVU2111	0.53	-0.5
2,206,937	+		DVU2111	0.53	+0.1
2,206,989	-		DVU2111	0.59	+0.6
2,207,082	+		DVU2111	0.70	+0.4
2,207,092	+		DVU2111	0.71	-0.0
2,207,101	+		DVU2111	0.72	-0.0
2,207,155	-		DVU2111	0.78	+0.5
2,207,155	-		DVU2111	0.78	-0.3
2,207,155	-		DVU2111	0.78	-0.4
2,207,300	-				-1.3
2,207,368	-				-0.0
2,207,453	-		DVU2112	0.24	+0.0
2,207,567	+		DVU2112	0.51	+1.1
2,207,672	-		DVU2112	0.76	-0.3
2,207,710	-		DVU2112	0.85	-0.5
2,207,710	-		DVU2112	0.85	+0.8
2,207,736	-				-0.6
2,207,791	-				-0.0
2,207,826	+				+0.8
2,207,946	-				-0.1
2,207,946	-				-0.5
2,207,946	-				-0.2
2,207,946	-				-2.0
2,208,011	+				-0.1
2,208,054	-				+0.1
2,208,170	-				+1.3
2,208,249	+		DVU2113	0.12	+0.3
2,208,325	+		DVU2113	0.18	+2.3
2,208,359	+		DVU2113	0.21	-0.3
2,208,463	-		DVU2113	0.28	+0.9
2,208,536	-		DVU2113	0.34	+0.2
2,208,603	-		DVU2113	0.39	+0.4
2,208,712	+		DVU2113	0.47	+2.3
2,208,730	-		DVU2113	0.48	-0.3