Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU2083

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
2,167,578	+	flaD	DVU2082	0.11	-0.6
2,167,661	-	flaD	DVU2082	0.20	-0.4
2,167,663	+	flaD	DVU2082	0.20	-0.8
2,167,760	-	flaD	DVU2082	0.31	-2.3
2,167,784	+	flaD	DVU2082	0.34	+0.4
2,167,786	+	flaD	DVU2082	0.34	-0.5
2,167,794	+	flaD	DVU2082	0.35	-1.2
2,167,802	-	flaD	DVU2082	0.36	-1.1
2,167,881	+	flaD	DVU2082	0.45	-0.6
2,167,911	-	flaD	DVU2082	0.48	-0.3
2,167,931	+	flaD	DVU2082	0.50	-2.1
2,167,931	+	flaD	DVU2082	0.50	+0.1
2,167,993	+	flaD	DVU2082	0.57	-0.9
2,167,993	+	flaD	DVU2082	0.57	+1.1
2,168,001	-	flaD	DVU2082	0.58	-0.4
2,168,001	-	flaD	DVU2082	0.58	+0.9
2,168,008	+	flaD	DVU2082	0.59	-0.0
2,168,076	-	flaD	DVU2082	0.67	+0.1
2,168,168	+	flaD	DVU2082	0.77	-0.2
2,168,168	+	flaD	DVU2082	0.77	-0.3
2,168,168	+	flaD	DVU2082	0.77	-0.5
2,168,168	+	flaD	DVU2082	0.77	+0.2
2,168,176	-	flaD	DVU2082	0.78	+0.1
2,168,176	-	flaD	DVU2082	0.78	-0.3
2,168,360	-				+0.1
2,168,460	+				+0.1
2,168,583	-				+0.3
2,168,958	+	relA	DVU2083	0.18	-0.9
2,169,227	-	relA	DVU2083	0.30	+0.4
2,169,227	-	relA	DVU2083	0.30	+0.2
2,169,273	-	relA	DVU2083	0.32	-0.6
2,169,514	+	relA	DVU2083	0.44	+0.1
2,169,583	+	relA	DVU2083	0.47	-2.3
2,169,657	+	relA	DVU2083	0.50	-0.3
2,169,659	+	relA	DVU2083	0.50	+0.4
2,169,665	-	relA	DVU2083	0.51	+0.8
2,170,007	-	relA	DVU2083	0.67	+0.4
2,170,467	+	relA	DVU2083	0.88	-2.1
2,170,499	-	relA	DVU2083	0.89	-0.3
2,170,598	-				-0.2
2,170,598	-				+0.5
2,170,690	-				-1.4
2,170,741	-				-0.0
2,170,905	-	appA	DVU2084	0.10	+0.1
2,170,935	-	appA	DVU2084	0.12	-1.1
2,170,965	+	appA	DVU2084	0.14	-0.2
2,170,990	-	appA	DVU2084	0.15	+0.4
2,171,035	+	appA	DVU2084	0.18	-1.1
2,171,044	+	appA	DVU2084	0.18	+0.3
2,171,046	+	appA	DVU2084	0.19	-0.7
2,171,091	-	appA	DVU2084	0.21	-0.5
2,171,144	+	appA	DVU2084	0.24	+0.4
2,171,341	+	appA	DVU2084	0.36	-0.4
2,171,341	+	appA	DVU2084	0.36	+0.2
2,171,341	+	appA	DVU2084	0.36	-0.0
2,171,341	-	appA	DVU2084	0.36	+0.4
2,171,349	-	appA	DVU2084	0.36	-0.5
2,171,349	-	appA	DVU2084	0.36	+0.1
2,171,351	+	appA	DVU2084	0.37	-0.5
2,171,355	+	appA	DVU2084	0.37	+0.7
2,171,426	-	appA	DVU2084	0.41	+0.1
2,171,582	+	appA	DVU2084	0.50	+0.1
2,171,591	-	appA	DVU2084	0.51	-0.0
2,171,664	+	appA	DVU2084	0.55	-0.3
2,171,669	+	appA	DVU2084	0.55	-0.4