Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1470

Experiment: Formate/Acetate-Sulfate (60/5-30 mM)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Formate/Acetate-Sulfate (60/5-30 mM)
1,550,661	-	rpsA	DVU1469	0.66	-0.2
1,550,672	+	rpsA	DVU1469	0.67	-0.7
1,550,672	-	rpsA	DVU1469	0.67	-2.2
1,550,942	-	rpsA	DVU1469	0.86	-0.5
1,550,986	-	rpsA	DVU1469	0.89	+0.1
1,550,986	-	rpsA	DVU1469	0.89	-0.4
1,551,007	+				-0.7
1,551,104	+				-0.4
1,551,123	+				-0.5
1,551,123	+				-0.2
1,551,123	+				+0.4
1,551,123	+				-0.6
1,551,131	-				-0.7
1,551,133	+				-0.3
1,551,133	+				+0.0
1,551,327	+				-0.0
1,551,344	+	ppiC	DVU1470	0.13	-0.2
1,551,478	-	ppiC	DVU1470	0.60	+0.9
1,551,508	+	ppiC	DVU1470	0.71	+0.9
1,551,530	+	ppiC	DVU1470	0.78	+0.5
1,551,536	+	ppiC	DVU1470	0.80	-0.0
1,551,536	+	ppiC	DVU1470	0.80	-0.4
1,551,602	+				+0.7
1,551,658	-				-0.8
1,551,660	+				+0.2
1,551,660	+				+0.3
1,551,818	-	hspC	DVU1471	0.36	-0.4
1,551,899	+	hspC	DVU1471	0.55	-0.3
1,551,939	-	hspC	DVU1471	0.64	+0.5
1,552,008	-	hspC	DVU1471	0.80	-0.4
1,552,028	-	hspC	DVU1471	0.85	+0.0
1,552,046	+	hspC	DVU1471	0.89	-0.0
1,552,054	-				+0.2
1,552,159	+				-0.2
1,552,159	+				+0.6
1,552,167	-				-0.0
1,552,245	-				-2.3
1,552,515	+		DVU1472	0.17	-0.3