Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1455
Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/5-30 mM) |
---|---|---|---|---|---|
remove | |||||
1,534,231 | + | -0.5 | |||
1,534,383 | + | DVU1455 | 0.23 | -0.8 | |
1,534,549 | - | DVU1455 | 0.46 | -0.4 | |
1,534,580 | - | DVU1455 | 0.50 | +1.3 | |
1,534,835 | + | DVU1455 | 0.84 | -1.3 | |
1,534,835 | + | DVU1455 | 0.84 | +1.3 | |
1,534,843 | - | DVU1455 | 0.85 | -2.0 | |
1,534,874 | - | DVU1455 | 0.89 | -1.1 | |
1,534,908 | + | -0.2 | |||
1,534,934 | + | -0.3 | |||
1,535,032 | - | -0.5 | |||
1,535,084 | - | -1.3 | |||
1,535,357 | + | DVU1456 | 0.36 | +0.1 | |
1,535,482 | - | DVU1456 | 0.48 | +0.8 | |
1,535,539 | + | DVU1456 | 0.54 | +0.1 | |
1,535,557 | - | DVU1456 | 0.56 | -0.2 | |
1,535,575 | + | DVU1456 | 0.58 | -1.2 | |
1,535,575 | - | DVU1456 | 0.58 | +0.7 | |
1,535,582 | - | DVU1456 | 0.58 | +0.0 | |
1,535,745 | - | DVU1456 | 0.74 | -0.5 | |
1,535,764 | - | DVU1456 | 0.76 | -0.4 | |
1,535,776 | - | DVU1456 | 0.77 | -0.4 |
Or see this region's nucleotide sequence