Strain Fitness in Desulfovibrio vulgaris Hildenborough JW710 around DVU1040
Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Formate/Acetate-Sulfate (60/5-30 mM) |
---|---|---|---|---|---|
remove | |||||
1,142,159 | + | +0.1 | |||
1,142,220 | - | +0.5 | |||
1,142,302 | - | DVU1039 | 0.16 | -0.9 | |
1,142,586 | + | DVU1039 | 0.60 | -0.0 | |
1,142,618 | + | DVU1039 | 0.65 | -2.7 | |
1,142,621 | - | DVU1039 | 0.66 | -0.8 | |
1,142,660 | - | DVU1039 | 0.72 | -0.6 | |
1,143,234 | - | hisB | DVU1040 | 0.65 | +0.2 |
1,143,284 | + | hisB | DVU1040 | 0.73 | -1.0 |
1,143,343 | + | hisB | DVU1040 | 0.83 | -0.9 |
1,143,370 | + | hisB | DVU1040 | 0.87 | -0.2 |
1,143,370 | + | hisB | DVU1040 | 0.87 | -1.6 |
1,143,462 | + | -0.6 | |||
1,143,483 | - | -0.1 | |||
1,143,497 | + | -1.1 |
Or see this region's nucleotide sequence