Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0735 and purN are separated by 26 nucleotides purN and DVU0737 are separated by 252 nucleotides
DVU0735: DVU0735 - MOSC domain protein (TIGR), at 822,186 to 822,620
DVU0735
DVU0736: purN - phosphoribosylglycinamide formyltransferase (TIGR), at 822,647 to 823,324
purN
DVU0737: DVU0737 - sensory box histidine kinase (TIGR), at 823,577 to 825,817
DVU0737
Position (kb) 822
823
824 Strain fitness (log2 ratio) -1
0
1
2 at 821.833 kb on - strand at 822.101 kb on - strand at 822.123 kb on + strand at 822.189 kb on + strand at 822.194 kb on + strand at 822.194 kb on + strand at 822.194 kb on + strand at 822.194 kb on + strand at 822.202 kb on - strand at 822.202 kb on - strand at 822.218 kb on + strand at 822.250 kb on + strand, within DVU0735 at 822.250 kb on + strand, within DVU0735 at 822.258 kb on - strand, within DVU0735 at 822.258 kb on - strand, within DVU0735 at 822.258 kb on - strand, within DVU0735 at 822.567 kb on + strand, within DVU0735 at 822.603 kb on - strand at 822.614 kb on + strand at 822.624 kb on + strand at 822.689 kb on - strand at 822.773 kb on + strand, within purN at 822.870 kb on - strand, within purN at 822.889 kb on + strand, within purN at 822.900 kb on - strand, within purN at 822.900 kb on - strand, within purN at 822.902 kb on - strand, within purN at 823.027 kb on - strand, within purN at 823.032 kb on - strand, within purN at 823.055 kb on - strand, within purN at 823.149 kb on - strand, within purN at 823.218 kb on + strand, within purN at 823.260 kb on - strand at 823.376 kb on + strand at 823.385 kb on + strand at 823.392 kb on - strand at 823.450 kb on - strand at 823.450 kb on - strand at 823.485 kb on - strand at 823.495 kb on + strand at 823.509 kb on - strand at 823.525 kb on + strand at 823.555 kb on + strand at 823.563 kb on - strand at 823.563 kb on - strand at 823.647 kb on - strand at 823.708 kb on - strand at 823.734 kb on - strand at 823.778 kb on - strand at 823.828 kb on - strand, within DVU0737 at 823.864 kb on + strand, within DVU0737 at 823.935 kb on + strand, within DVU0737 at 823.943 kb on - strand, within DVU0737 at 823.962 kb on + strand, within DVU0737 at 823.962 kb on + strand, within DVU0737 at 823.981 kb on + strand, within DVU0737 at 824.004 kb on + strand, within DVU0737 at 824.070 kb on - strand, within DVU0737 at 824.070 kb on - strand, within DVU0737 at 824.164 kb on + strand, within DVU0737 at 824.217 kb on - strand, within DVU0737 at 824.265 kb on + strand, within DVU0737 at 824.267 kb on - strand, within DVU0737 at 824.286 kb on - strand, within DVU0737 at 824.286 kb on - strand, within DVU0737 at 824.303 kb on + strand, within DVU0737 at 824.303 kb on + strand, within DVU0737
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/5-30 mM) remove 821,833 - -0.2 822,101 - +0.2 822,123 + +0.4 822,189 + -0.2 822,194 + -0.3 822,194 + +0.4 822,194 + +0.1 822,194 + -0.6 822,202 - -0.4 822,202 - -1.0 822,218 + -0.8 822,250 + DVU0735 0.15 -0.0 822,250 + DVU0735 0.15 -1.1 822,258 - DVU0735 0.17 -0.5 822,258 - DVU0735 0.17 +0.0 822,258 - DVU0735 0.17 -0.4 822,567 + DVU0735 0.88 +0.7 822,603 - +0.3 822,614 + -0.6 822,624 + +0.6 822,689 - +1.6 822,773 + purN DVU0736 0.19 -0.6 822,870 - purN DVU0736 0.33 +0.1 822,889 + purN DVU0736 0.36 +0.2 822,900 - purN DVU0736 0.37 +0.2 822,900 - purN DVU0736 0.37 +0.2 822,902 - purN DVU0736 0.38 +1.1 823,027 - purN DVU0736 0.56 +1.8 823,032 - purN DVU0736 0.57 -1.4 823,055 - purN DVU0736 0.60 -0.1 823,149 - purN DVU0736 0.74 +0.1 823,218 + purN DVU0736 0.84 -0.2 823,260 - -0.5 823,376 + -0.2 823,385 + -0.1 823,392 - +0.4 823,450 - -0.3 823,450 - +0.1 823,485 - +0.0 823,495 + +0.6 823,509 - -1.0 823,525 + -0.8 823,555 + -0.3 823,563 - +0.6 823,563 - -0.4 823,647 - -0.3 823,708 - +0.7 823,734 - +0.1 823,778 - -0.4 823,828 - DVU0737 0.11 +0.4 823,864 + DVU0737 0.13 -0.3 823,935 + DVU0737 0.16 +0.2 823,943 - DVU0737 0.16 -0.0 823,962 + DVU0737 0.17 -0.2 823,962 + DVU0737 0.17 -0.5 823,981 + DVU0737 0.18 -0.1 824,004 + DVU0737 0.19 -0.5 824,070 - DVU0737 0.22 -0.1 824,070 - DVU0737 0.22 +0.0 824,164 + DVU0737 0.26 +0.0 824,217 - DVU0737 0.29 +0.2 824,265 + DVU0737 0.31 -0.2 824,267 - DVU0737 0.31 -0.1 824,286 - DVU0737 0.32 -0.2 824,286 - DVU0737 0.32 +0.3 824,303 + DVU0737 0.32 -0.1 824,303 + DVU0737 0.32 -0.5
Or see this region's nucleotide sequence