Experiment: Formate/Acetate-Sulfate (60/5-30 mM)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0692 and narH are separated by 3 nucleotides narH and DVU0694 are separated by 12 nucleotides
DVU0692: DVU0692 - molybdopterin oxidoreductase, transmembrane subunit, putative (TIGR), at 766,527 to 767,786
DVU0692
DVU0693: narH - molybdopterin oxidoreductase, iron-sulfur cluster-binding subunit, putative (TIGR), containing cytochrome c heme-binding site (VIMSS_AUTO), at 767,790 to 768,557
narH
DVU0694: DVU0694 - molybdopterin oxidoreductase, molybdopterin-binding subunit, putative (TIGR), at 768,570 to 770,645
DVU0694
Position (kb) 767
768
769 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 766.797 kb on + strand, within DVU0692 at 766.812 kb on - strand, within DVU0692 at 766.819 kb on + strand, within DVU0692 at 766.848 kb on - strand, within DVU0692 at 766.912 kb on + strand, within DVU0692 at 766.918 kb on - strand, within DVU0692 at 766.957 kb on + strand, within DVU0692 at 767.197 kb on + strand, within DVU0692 at 767.304 kb on + strand, within DVU0692 at 767.458 kb on - strand, within DVU0692 at 767.656 kb on + strand, within DVU0692 at 767.696 kb on - strand at 767.778 kb on - strand at 767.794 kb on + strand at 767.939 kb on + strand, within narH at 768.005 kb on + strand, within narH at 768.051 kb on + strand, within narH at 768.066 kb on - strand, within narH at 768.124 kb on - strand, within narH at 768.147 kb on + strand, within narH at 768.154 kb on + strand, within narH at 768.162 kb on - strand, within narH at 768.169 kb on + strand, within narH at 768.310 kb on + strand, within narH at 768.318 kb on - strand, within narH at 768.398 kb on + strand, within narH at 768.411 kb on - strand, within narH at 768.493 kb on - strand at 768.623 kb on - strand at 768.698 kb on + strand at 768.706 kb on - strand at 768.773 kb on - strand at 768.786 kb on - strand, within DVU0694 at 768.806 kb on - strand, within DVU0694 at 768.837 kb on + strand, within DVU0694 at 768.856 kb on + strand, within DVU0694 at 768.864 kb on - strand, within DVU0694 at 768.864 kb on - strand, within DVU0694 at 769.044 kb on + strand, within DVU0694 at 769.052 kb on - strand, within DVU0694 at 769.136 kb on + strand, within DVU0694 at 769.144 kb on - strand, within DVU0694 at 769.197 kb on - strand, within DVU0694 at 769.253 kb on - strand, within DVU0694 at 769.349 kb on + strand, within DVU0694 at 769.368 kb on - strand, within DVU0694 at 769.409 kb on - strand, within DVU0694 at 769.444 kb on + strand, within DVU0694 at 769.452 kb on - strand, within DVU0694 at 769.520 kb on - strand, within DVU0694 at 769.548 kb on - strand, within DVU0694
Per-strain Table
Position Strand Gene LocusTag Fraction Formate/Acetate-Sulfate (60/5-30 mM) remove 766,797 + DVU0692 0.21 -0.6 766,812 - DVU0692 0.23 -1.2 766,819 + DVU0692 0.23 -1.7 766,848 - DVU0692 0.25 -0.7 766,912 + DVU0692 0.31 -1.5 766,918 - DVU0692 0.31 -1.5 766,957 + DVU0692 0.34 -1.6 767,197 + DVU0692 0.53 -0.8 767,304 + DVU0692 0.62 -1.6 767,458 - DVU0692 0.74 -1.7 767,656 + DVU0692 0.90 -0.4 767,696 - -0.5 767,778 - -3.0 767,794 + -1.7 767,939 + narH DVU0693 0.19 -1.1 768,005 + narH DVU0693 0.28 -2.0 768,051 + narH DVU0693 0.34 -0.1 768,066 - narH DVU0693 0.36 -0.6 768,124 - narH DVU0693 0.43 -2.6 768,147 + narH DVU0693 0.46 -1.8 768,154 + narH DVU0693 0.47 -1.0 768,162 - narH DVU0693 0.48 +0.6 768,169 + narH DVU0693 0.49 -1.2 768,310 + narH DVU0693 0.68 -1.7 768,318 - narH DVU0693 0.69 -0.5 768,398 + narH DVU0693 0.79 -0.7 768,411 - narH DVU0693 0.81 -1.6 768,493 - -0.3 768,623 - -0.8 768,698 + -1.5 768,706 - -1.2 768,773 - -1.6 768,786 - DVU0694 0.10 -1.1 768,806 - DVU0694 0.11 -1.2 768,837 + DVU0694 0.13 -1.8 768,856 + DVU0694 0.14 -1.1 768,864 - DVU0694 0.14 -1.6 768,864 - DVU0694 0.14 -1.0 769,044 + DVU0694 0.23 -1.7 769,052 - DVU0694 0.23 -0.9 769,136 + DVU0694 0.27 -2.1 769,144 - DVU0694 0.28 -1.3 769,197 - DVU0694 0.30 -1.5 769,253 - DVU0694 0.33 -0.4 769,349 + DVU0694 0.38 +0.5 769,368 - DVU0694 0.38 -1.8 769,409 - DVU0694 0.40 -0.4 769,444 + DVU0694 0.42 -1.9 769,452 - DVU0694 0.42 -0.3 769,520 - DVU0694 0.46 -1.0 769,548 - DVU0694 0.47 -0.6
Or see this region's nucleotide sequence