Experiment: Pyruvate (fermenting) with L-Cysteine as sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt gap-1 and DVU0566 are separated by 19 nucleotides DVU0566 and DVU0567 are separated by 214 nucleotides
DVU0565: gap-1 - glyceraldehyde 3-phosphate dehydrogenase (TIGR), at 630,087 to 631,103
gap-1
DVU0566: DVU0566 - GAF domain protein (TIGR), at 631,123 to 631,680
DVU0566
DVU0567: DVU0567 - TerC family protein (TIGR), at 631,895 to 632,974
DVU0567
Position (kb) 631
632 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 630.149 kb on - strand at 630.176 kb on - strand at 630.194 kb on - strand, within gap-1 at 630.235 kb on + strand, within gap-1 at 630.243 kb on - strand, within gap-1 at 630.273 kb on + strand, within gap-1 at 630.283 kb on + strand, within gap-1 at 630.289 kb on + strand, within gap-1 at 630.302 kb on - strand, within gap-1 at 630.436 kb on - strand, within gap-1 at 630.450 kb on + strand, within gap-1 at 630.455 kb on + strand, within gap-1 at 630.455 kb on + strand, within gap-1 at 630.455 kb on + strand, within gap-1 at 630.455 kb on + strand, within gap-1 at 630.455 kb on + strand, within gap-1 at 630.458 kb on - strand, within gap-1 at 630.515 kb on - strand, within gap-1 at 630.635 kb on - strand, within gap-1 at 630.682 kb on - strand, within gap-1 at 630.721 kb on + strand, within gap-1 at 630.767 kb on - strand, within gap-1 at 630.964 kb on + strand, within gap-1 at 630.972 kb on + strand, within gap-1 at 631.017 kb on - strand at 631.285 kb on + strand, within DVU0566 at 631.335 kb on + strand, within DVU0566 at 631.348 kb on - strand, within DVU0566 at 631.407 kb on + strand, within DVU0566 at 631.422 kb on - strand, within DVU0566 at 631.469 kb on - strand, within DVU0566 at 631.476 kb on - strand, within DVU0566 at 631.623 kb on - strand, within DVU0566 at 631.635 kb on - strand at 631.696 kb on + strand at 631.751 kb on - strand at 631.968 kb on + strand at 631.973 kb on + strand at 631.981 kb on - strand at 632.105 kb on - strand, within DVU0567 at 632.110 kb on - strand, within DVU0567 at 632.190 kb on + strand, within DVU0567 at 632.255 kb on + strand, within DVU0567 at 632.255 kb on + strand, within DVU0567 at 632.263 kb on - strand, within DVU0567 at 632.295 kb on - strand, within DVU0567 at 632.382 kb on - strand, within DVU0567 at 632.393 kb on + strand, within DVU0567 at 632.406 kb on + strand, within DVU0567 at 632.453 kb on + strand, within DVU0567 at 632.634 kb on + strand, within DVU0567 at 632.642 kb on - strand, within DVU0567 at 632.642 kb on - strand, within DVU0567
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate (fermenting) with L-Cysteine as sulfur source remove 630,149 - -0.0 630,176 - -0.2 630,194 - gap-1 DVU0565 0.11 -0.1 630,235 + gap-1 DVU0565 0.15 -0.4 630,243 - gap-1 DVU0565 0.15 -0.6 630,273 + gap-1 DVU0565 0.18 -0.5 630,283 + gap-1 DVU0565 0.19 -0.2 630,289 + gap-1 DVU0565 0.20 +0.0 630,302 - gap-1 DVU0565 0.21 +0.8 630,436 - gap-1 DVU0565 0.34 -0.2 630,450 + gap-1 DVU0565 0.36 -0.4 630,455 + gap-1 DVU0565 0.36 +0.4 630,455 + gap-1 DVU0565 0.36 -0.2 630,455 + gap-1 DVU0565 0.36 -1.1 630,455 + gap-1 DVU0565 0.36 -0.6 630,455 + gap-1 DVU0565 0.36 -0.1 630,458 - gap-1 DVU0565 0.36 +0.5 630,515 - gap-1 DVU0565 0.42 +0.1 630,635 - gap-1 DVU0565 0.54 -0.7 630,682 - gap-1 DVU0565 0.59 -0.2 630,721 + gap-1 DVU0565 0.62 -0.4 630,767 - gap-1 DVU0565 0.67 +0.4 630,964 + gap-1 DVU0565 0.86 -0.2 630,972 + gap-1 DVU0565 0.87 -0.5 631,017 - +1.4 631,285 + DVU0566 0.29 +0.1 631,335 + DVU0566 0.38 +0.8 631,348 - DVU0566 0.40 +0.1 631,407 + DVU0566 0.51 -1.1 631,422 - DVU0566 0.54 -0.8 631,469 - DVU0566 0.62 -0.1 631,476 - DVU0566 0.63 -0.2 631,623 - DVU0566 0.90 -1.8 631,635 - -0.4 631,696 + -0.2 631,751 - -0.2 631,968 + -0.2 631,973 + -0.2 631,981 - +0.1 632,105 - DVU0567 0.19 -1.6 632,110 - DVU0567 0.20 -0.4 632,190 + DVU0567 0.27 -0.1 632,255 + DVU0567 0.33 -0.2 632,255 + DVU0567 0.33 -0.4 632,263 - DVU0567 0.34 +0.4 632,295 - DVU0567 0.37 -0.6 632,382 - DVU0567 0.45 -0.4 632,393 + DVU0567 0.46 +3.2 632,406 + DVU0567 0.47 -0.1 632,453 + DVU0567 0.52 -0.2 632,634 + DVU0567 0.68 -0.4 632,642 - DVU0567 0.69 -0.4 632,642 - DVU0567 0.69 -0.0
Or see this region's nucleotide sequence