Experiment: Pyruvate (fermenting) with L-Cysteine as sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0210 and DVU0211 are separated by 49 nucleotides DVU0211 and DVU0212 overlap by 1 nucleotides DVU0212 and DVU0213 are separated by 199 nucleotides
DVU0210: DVU0210 - tail sheath protein, putative (TIGR), at 250,631 to 252,094
DVU0210
DVU0211: DVU0211 - tail tube protein, putative (TIGR), at 252,144 to 252,509
DVU0211
DVU0212: DVU0212 - conserved hypothetical protein (TIGR), at 252,509 to 252,769
DVU0212
DVU0213: DVU0213 - conserved domain protein (TIGR), at 252,969 to 254,459
DVU0213
Position (kb) 252
253 Strain fitness (log2 ratio) -1
0
1
2 at 251.730 kb on - strand, within DVU0210 at 251.741 kb on - strand, within DVU0210 at 252.022 kb on + strand at 252.022 kb on + strand at 252.069 kb on + strand at 252.616 kb on - strand, within DVU0212 at 252.635 kb on - strand, within DVU0212 at 252.757 kb on - strand at 253.170 kb on - strand, within DVU0213 at 253.370 kb on + strand, within DVU0213 at 253.380 kb on + strand, within DVU0213 at 253.390 kb on - strand, within DVU0213 at 253.402 kb on - strand, within DVU0213 at 253.412 kb on - strand, within DVU0213 at 253.442 kb on + strand, within DVU0213 at 253.473 kb on + strand, within DVU0213 at 253.577 kb on - strand, within DVU0213 at 253.623 kb on + strand, within DVU0213 at 253.674 kb on + strand, within DVU0213 at 253.683 kb on - strand, within DVU0213 at 253.754 kb on + strand, within DVU0213 at 253.754 kb on + strand, within DVU0213 at 253.754 kb on + strand, within DVU0213 at 253.769 kb on + strand, within DVU0213
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate (fermenting) with L-Cysteine as sulfur source remove 251,730 - DVU0210 0.75 -0.7 251,741 - DVU0210 0.76 -0.4 252,022 + -0.9 252,022 + -0.7 252,069 + -0.5 252,616 - DVU0212 0.41 -0.3 252,635 - DVU0212 0.48 -1.6 252,757 - -0.3 253,170 - DVU0213 0.13 +0.1 253,370 + DVU0213 0.27 -0.4 253,380 + DVU0213 0.28 +0.2 253,390 - DVU0213 0.28 -0.2 253,402 - DVU0213 0.29 -0.6 253,412 - DVU0213 0.30 +1.4 253,442 + DVU0213 0.32 -1.3 253,473 + DVU0213 0.34 +0.6 253,577 - DVU0213 0.41 -1.1 253,623 + DVU0213 0.44 +2.1 253,674 + DVU0213 0.47 -0.3 253,683 - DVU0213 0.48 +0.1 253,754 + DVU0213 0.53 -0.6 253,754 + DVU0213 0.53 -0.6 253,754 + DVU0213 0.53 -0.6 253,769 + DVU0213 0.54 -1.3
Or see this region's nucleotide sequence