Experiment: Pyruvate (fermenting) with L-Cysteine as sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3193 and engA are separated by 254 nucleotides engA and DVU3195 are separated by 84 nucleotides
DVU3193: DVU3193 - DNA-binding domain, excisionase family (TIGR), at 3,354,015 to 3,354,926
DVU3193
DVU3194: engA - GTP-binding protein EngA (TIGR), at 3,355,181 to 3,356,656
engA
DVU3195: DVU3195 - lipoprotein, putative (TIGR), at 3,356,741 to 3,358,129
DVU3195
Position (kb)
3355
3356
3357 Strain fitness (log2 ratio)
-1
0
1 at 3354.191 kb on - strand, within DVU3193 at 3354.240 kb on - strand, within DVU3193 at 3354.336 kb on - strand, within DVU3193 at 3354.355 kb on + strand, within DVU3193 at 3354.376 kb on - strand, within DVU3193 at 3354.524 kb on - strand, within DVU3193 at 3354.679 kb on + strand, within DVU3193 at 3354.684 kb on + strand, within DVU3193 at 3354.684 kb on + strand, within DVU3193 at 3354.687 kb on - strand, within DVU3193 at 3354.757 kb on - strand, within DVU3193 at 3354.757 kb on - strand, within DVU3193 at 3354.759 kb on + strand, within DVU3193 at 3354.778 kb on + strand, within DVU3193 at 3354.786 kb on - strand, within DVU3193 at 3354.803 kb on - strand, within DVU3193 at 3354.803 kb on - strand, within DVU3193 at 3354.858 kb on + strand at 3354.942 kb on - strand at 3354.988 kb on + strand at 3354.990 kb on + strand at 3354.996 kb on - strand at 3354.998 kb on - strand at 3355.069 kb on + strand at 3355.112 kb on - strand at 3356.698 kb on - strand at 3356.717 kb on - strand at 3356.878 kb on - strand at 3356.956 kb on + strand, within DVU3195 at 3356.984 kb on + strand, within DVU3195 at 3357.006 kb on - strand, within DVU3195 at 3357.051 kb on + strand, within DVU3195 at 3357.096 kb on + strand, within DVU3195 at 3357.156 kb on - strand, within DVU3195 at 3357.184 kb on - strand, within DVU3195 at 3357.255 kb on - strand, within DVU3195 at 3357.265 kb on - strand, within DVU3195 at 3357.426 kb on + strand, within DVU3195 at 3357.476 kb on + strand, within DVU3195 at 3357.571 kb on + strand, within DVU3195 at 3357.573 kb on - strand, within DVU3195 at 3357.598 kb on - strand, within DVU3195 at 3357.620 kb on - strand, within DVU3195
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate (fermenting) with L-Cysteine as sulfur source remove 3,354,191 - DVU3193 0.19 +1.0 3,354,240 - DVU3193 0.25 +1.0 3,354,336 - DVU3193 0.35 +0.6 3,354,355 + DVU3193 0.37 -0.8 3,354,376 - DVU3193 0.40 +0.9 3,354,524 - DVU3193 0.56 +0.5 3,354,679 + DVU3193 0.73 +0.9 3,354,684 + DVU3193 0.73 +0.7 3,354,684 + DVU3193 0.73 +0.0 3,354,687 - DVU3193 0.74 +0.4 3,354,757 - DVU3193 0.81 +1.5 3,354,757 - DVU3193 0.81 +0.9 3,354,759 + DVU3193 0.82 +0.6 3,354,778 + DVU3193 0.84 +0.2 3,354,786 - DVU3193 0.85 +0.7 3,354,803 - DVU3193 0.86 +1.0 3,354,803 - DVU3193 0.86 +1.3 3,354,858 + +0.5 3,354,942 - -0.2 3,354,988 + -0.3 3,354,990 + -0.3 3,354,996 - -1.1 3,354,998 - -1.6 3,355,069 + -0.3 3,355,112 - -0.4 3,356,698 - -0.4 3,356,717 - -0.3 3,356,878 - -0.1 3,356,956 + DVU3195 0.15 +0.8 3,356,984 + DVU3195 0.17 -0.3 3,357,006 - DVU3195 0.19 +0.1 3,357,051 + DVU3195 0.22 +0.7 3,357,096 + DVU3195 0.26 -0.7 3,357,156 - DVU3195 0.30 -0.7 3,357,184 - DVU3195 0.32 +0.1 3,357,255 - DVU3195 0.37 +0.0 3,357,265 - DVU3195 0.38 +0.6 3,357,426 + DVU3195 0.49 -0.0 3,357,476 + DVU3195 0.53 -0.2 3,357,571 + DVU3195 0.60 +0.2 3,357,573 - DVU3195 0.60 +1.6 3,357,598 - DVU3195 0.62 -0.8 3,357,620 - DVU3195 0.63 +0.9
Or see this region's nucleotide sequence