Experiment: Pyruvate (fermenting) with L-Cysteine as sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0725 and tgt are separated by 467 nucleotides tgt and DVU0727 are separated by 44 nucleotides DVU0727 and DVU0728 are separated by 28 nucleotides
DVU0725: DVU0725 - conserved hypothetical protein (TIGR), at 808,323 to 810,470
DVU0725
DVU0726: tgt - queuine tRNA-ribosyltransferase (TIGR), at 810,938 to 812,065
tgt
DVU0727: DVU0727 - conserved hypothetical protein (TIGR), at 812,110 to 812,784
DVU0727
DVU0728: DVU0728 - hypothetical protein (TIGR), at 812,813 to 812,983
DVU0728
Position (kb) 810
811
812
813 Strain fitness (log2 ratio) -2
-1
0
1
2 at 809.947 kb on + strand, within DVU0725 at 809.984 kb on - strand, within DVU0725 at 809.984 kb on - strand, within DVU0725 at 810.009 kb on - strand, within DVU0725 at 810.009 kb on - strand, within DVU0725 at 810.044 kb on + strand, within DVU0725 at 810.079 kb on - strand, within DVU0725 at 810.097 kb on + strand, within DVU0725 at 810.107 kb on + strand, within DVU0725 at 810.160 kb on + strand, within DVU0725 at 810.191 kb on + strand, within DVU0725 at 810.196 kb on + strand, within DVU0725 at 810.235 kb on + strand, within DVU0725 at 810.261 kb on + strand at 810.321 kb on + strand at 810.408 kb on + strand at 810.544 kb on + strand at 810.545 kb on + strand at 810.758 kb on + strand at 810.787 kb on + strand at 810.893 kb on + strand at 810.941 kb on + strand at 811.192 kb on + strand, within tgt at 811.218 kb on + strand, within tgt at 811.225 kb on - strand, within tgt at 811.301 kb on + strand, within tgt at 811.500 kb on + strand, within tgt at 811.503 kb on - strand, within tgt at 811.524 kb on + strand, within tgt at 811.527 kb on + strand, within tgt at 811.560 kb on - strand, within tgt at 811.590 kb on + strand, within tgt at 811.598 kb on - strand, within tgt at 811.668 kb on + strand, within tgt at 811.714 kb on - strand, within tgt at 811.793 kb on + strand, within tgt at 811.795 kb on + strand, within tgt at 811.803 kb on - strand, within tgt at 811.803 kb on - strand, within tgt at 811.808 kb on - strand, within tgt at 811.868 kb on + strand, within tgt at 811.912 kb on - strand, within tgt at 811.988 kb on + strand at 811.996 kb on - strand at 812.061 kb on + strand at 812.150 kb on - strand at 812.207 kb on + strand, within DVU0727 at 812.214 kb on + strand, within DVU0727 at 812.301 kb on + strand, within DVU0727 at 812.358 kb on + strand, within DVU0727 at 812.364 kb on + strand, within DVU0727 at 812.372 kb on - strand, within DVU0727 at 812.372 kb on - strand, within DVU0727 at 812.376 kb on + strand, within DVU0727 at 812.386 kb on + strand, within DVU0727 at 812.394 kb on - strand, within DVU0727 at 812.396 kb on - strand, within DVU0727 at 812.411 kb on - strand, within DVU0727 at 812.411 kb on - strand, within DVU0727 at 812.426 kb on - strand, within DVU0727 at 812.491 kb on + strand, within DVU0727 at 812.499 kb on - strand, within DVU0727 at 812.565 kb on + strand, within DVU0727 at 812.596 kb on - strand, within DVU0727 at 812.655 kb on - strand, within DVU0727
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate (fermenting) with L-Cysteine as sulfur source remove 809,947 + DVU0725 0.76 -0.8 809,984 - DVU0725 0.77 -0.3 809,984 - DVU0725 0.77 +0.7 810,009 - DVU0725 0.78 -0.3 810,009 - DVU0725 0.78 -0.0 810,044 + DVU0725 0.80 -0.2 810,079 - DVU0725 0.82 +0.0 810,097 + DVU0725 0.83 -0.3 810,107 + DVU0725 0.83 +0.1 810,160 + DVU0725 0.86 -1.1 810,191 + DVU0725 0.87 -0.2 810,196 + DVU0725 0.87 +0.7 810,235 + DVU0725 0.89 +0.1 810,261 + +0.2 810,321 + -0.6 810,408 + -0.2 810,544 + -0.6 810,545 + +0.3 810,758 + -0.5 810,787 + -0.5 810,893 + +0.1 810,941 + -0.6 811,192 + tgt DVU0726 0.23 +0.6 811,218 + tgt DVU0726 0.25 -0.4 811,225 - tgt DVU0726 0.25 +0.2 811,301 + tgt DVU0726 0.32 +0.5 811,500 + tgt DVU0726 0.50 -0.3 811,503 - tgt DVU0726 0.50 -0.8 811,524 + tgt DVU0726 0.52 -1.1 811,527 + tgt DVU0726 0.52 -1.6 811,560 - tgt DVU0726 0.55 -0.0 811,590 + tgt DVU0726 0.58 -0.3 811,598 - tgt DVU0726 0.59 -2.2 811,668 + tgt DVU0726 0.65 +0.0 811,714 - tgt DVU0726 0.69 -1.1 811,793 + tgt DVU0726 0.76 -0.5 811,795 + tgt DVU0726 0.76 -0.5 811,803 - tgt DVU0726 0.77 +0.5 811,803 - tgt DVU0726 0.77 -0.4 811,808 - tgt DVU0726 0.77 -0.1 811,868 + tgt DVU0726 0.82 -0.1 811,912 - tgt DVU0726 0.86 -0.4 811,988 + -1.6 811,996 - -0.4 812,061 + +0.4 812,150 - -0.4 812,207 + DVU0727 0.14 +0.3 812,214 + DVU0727 0.15 -0.3 812,301 + DVU0727 0.28 -1.0 812,358 + DVU0727 0.37 +0.5 812,364 + DVU0727 0.38 -0.3 812,372 - DVU0727 0.39 +0.1 812,372 - DVU0727 0.39 -0.2 812,376 + DVU0727 0.39 +0.1 812,386 + DVU0727 0.41 +0.1 812,394 - DVU0727 0.42 +0.1 812,396 - DVU0727 0.42 +1.8 812,411 - DVU0727 0.45 +0.4 812,411 - DVU0727 0.45 -1.3 812,426 - DVU0727 0.47 -0.3 812,491 + DVU0727 0.56 -0.3 812,499 - DVU0727 0.58 +0.2 812,565 + DVU0727 0.67 +0.1 812,596 - DVU0727 0.72 +0.6 812,655 - DVU0727 0.81 -0.8
Or see this region's nucleotide sequence