Experiment: Pyruvate (fermenting) with L-Cysteine as sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0230 and DVU0231 are separated by 80 nucleotides DVU0231 and DVU0232 overlap by 8 nucleotides DVU0232 and DORF26446 are separated by 142 nucleotides DORF26446 and DVU0234 are separated by 787 nucleotides
DVU0230: DVU0230 - transcriptional regulator cII, putative (TIGR), at 265,802 to 266,266
DVU0230
DVU0231: DVU0231 - hypothetical protein (TIGR), at 266,347 to 266,571
DVU0231
DVU0232: DVU0232 - hypothetical protein (TIGR), at 266,564 to 266,812
DVU0232
DORF26446: DORF26446 - no description, at 266,955 to 267,194
DORF26446
DVU0234: DVU0234 - hypothetical protein (TIGR), at 267,982 to 268,305
DVU0234
Position (kb) 266
267
268 Strain fitness (log2 ratio) -1
0
1
2 at 266.024 kb on + strand, within DVU0230 at 266.032 kb on - strand, within DVU0230 at 266.032 kb on - strand, within DVU0230 at 266.032 kb on - strand, within DVU0230 at 266.038 kb on - strand, within DVU0230 at 266.042 kb on - strand, within DVU0230 at 266.190 kb on - strand, within DVU0230 at 266.197 kb on + strand, within DVU0230 at 266.205 kb on - strand, within DVU0230 at 266.233 kb on - strand at 266.287 kb on + strand at 266.360 kb on + strand at 266.368 kb on - strand at 266.381 kb on + strand, within DVU0231 at 266.473 kb on + strand, within DVU0231 at 266.473 kb on + strand, within DVU0231 at 266.501 kb on + strand, within DVU0231 at 266.509 kb on - strand, within DVU0231 at 266.509 kb on - strand, within DVU0231 at 266.525 kb on + strand, within DVU0231 at 266.538 kb on - strand, within DVU0231 at 266.617 kb on + strand, within DVU0232 at 266.633 kb on - strand, within DVU0232 at 266.807 kb on + strand at 266.807 kb on + strand at 266.920 kb on - strand at 266.922 kb on + strand at 266.922 kb on + strand at 266.922 kb on + strand at 266.922 kb on + strand at 266.930 kb on - strand at 266.930 kb on - strand at 266.930 kb on - strand at 266.930 kb on - strand at 266.930 kb on - strand at 266.935 kb on - strand at 266.942 kb on - strand at 267.059 kb on + strand, within DORF26446 at 267.211 kb on + strand at 267.221 kb on + strand at 267.221 kb on + strand at 267.221 kb on + strand at 267.221 kb on + strand at 267.221 kb on + strand at 267.229 kb on - strand at 267.229 kb on - strand at 267.229 kb on - strand at 267.281 kb on + strand at 267.489 kb on + strand at 267.491 kb on + strand at 267.508 kb on - strand at 267.615 kb on + strand at 267.674 kb on - strand at 267.681 kb on + strand at 267.728 kb on - strand at 267.743 kb on - strand at 267.769 kb on - strand at 267.779 kb on - strand at 267.812 kb on - strand at 267.839 kb on - strand at 267.902 kb on - strand at 267.935 kb on + strand at 267.981 kb on - strand at 268.025 kb on - strand, within DVU0234 at 268.025 kb on - strand, within DVU0234 at 268.027 kb on + strand, within DVU0234 at 268.051 kb on + strand, within DVU0234 at 268.059 kb on - strand, within DVU0234 at 268.059 kb on - strand, within DVU0234 at 268.083 kb on + strand, within DVU0234 at 268.178 kb on - strand, within DVU0234
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate (fermenting) with L-Cysteine as sulfur source remove 266,024 + DVU0230 0.48 -0.3 266,032 - DVU0230 0.49 -0.8 266,032 - DVU0230 0.49 -0.8 266,032 - DVU0230 0.49 -0.4 266,038 - DVU0230 0.51 -1.1 266,042 - DVU0230 0.52 -1.5 266,190 - DVU0230 0.83 +0.0 266,197 + DVU0230 0.85 +1.1 266,205 - DVU0230 0.87 +1.5 266,233 - -0.0 266,287 + -0.3 266,360 + +0.6 266,368 - -0.4 266,381 + DVU0231 0.15 -0.3 266,473 + DVU0231 0.56 +0.3 266,473 + DVU0231 0.56 -0.1 266,501 + DVU0231 0.68 +0.5 266,509 - DVU0231 0.72 +0.8 266,509 - DVU0231 0.72 +0.2 266,525 + DVU0231 0.79 -0.5 266,538 - DVU0231 0.85 -0.3 266,617 + DVU0232 0.21 -0.3 266,633 - DVU0232 0.28 +0.4 266,807 + -0.2 266,807 + -0.4 266,920 - +0.4 266,922 + +0.1 266,922 + -0.1 266,922 + +1.0 266,922 + +0.8 266,930 - +0.3 266,930 - -0.3 266,930 - +0.7 266,930 - -0.1 266,930 - -0.7 266,935 - -0.3 266,942 - +0.4 267,059 + DORF26446 0.43 -1.7 267,211 + -0.4 267,221 + -0.1 267,221 + -0.3 267,221 + -1.1 267,221 + -0.5 267,221 + -0.1 267,229 - -0.5 267,229 - -0.1 267,229 - +0.4 267,281 + +0.1 267,489 + -1.4 267,491 + +0.7 267,508 - +0.1 267,615 + +1.5 267,674 - -0.5 267,681 + +0.2 267,728 - +0.7 267,743 - +0.1 267,769 - -0.2 267,779 - -0.3 267,812 - +1.4 267,839 - -0.6 267,902 - -0.1 267,935 + -1.2 267,981 - +0.2 268,025 - DVU0234 0.13 -1.0 268,025 - DVU0234 0.13 -0.5 268,027 + DVU0234 0.14 +0.0 268,051 + DVU0234 0.21 -0.7 268,059 - DVU0234 0.24 -0.5 268,059 - DVU0234 0.24 +1.8 268,083 + DVU0234 0.31 +0.2 268,178 - DVU0234 0.60 -0.8
Or see this region's nucleotide sequence