Experiment: Gly-Glu (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_596 and Pf6N2E2_597 are separated by 120 nucleotides Pf6N2E2_597 and Pf6N2E2_598 are separated by 16 nucleotides Pf6N2E2_598 and Pf6N2E2_599 are separated by 93 nucleotides
Pf6N2E2_596 - Arsenic efflux pump protein, at 671,598 to 672,881
_596
Pf6N2E2_597 - FIG00953564: hypothetical protein, at 673,002 to 673,967
_597
Pf6N2E2_598 - hypothetical protein, at 673,984 to 674,145
_598
Pf6N2E2_599 - NAD kinase (EC 2.7.1.23), at 674,239 to 675,129
_599
Position (kb) 673
674 Strain fitness (log2 ratio) -1
0
1
2 at 672.271 kb on - strand, within Pf6N2E2_596 at 672.465 kb on + strand, within Pf6N2E2_596 at 672.465 kb on + strand, within Pf6N2E2_596 at 672.465 kb on + strand, within Pf6N2E2_596 at 672.477 kb on + strand, within Pf6N2E2_596 at 672.507 kb on + strand, within Pf6N2E2_596 at 672.684 kb on + strand, within Pf6N2E2_596 at 672.684 kb on + strand, within Pf6N2E2_596 at 672.684 kb on + strand, within Pf6N2E2_596 at 672.798 kb on + strand at 672.798 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.801 kb on + strand at 672.802 kb on - strand at 672.802 kb on - strand at 672.802 kb on - strand at 672.940 kb on - strand at 673.048 kb on - strand at 673.339 kb on + strand, within Pf6N2E2_597 at 673.378 kb on - strand, within Pf6N2E2_597 at 673.536 kb on - strand, within Pf6N2E2_597 at 673.555 kb on + strand, within Pf6N2E2_597 at 673.555 kb on + strand, within Pf6N2E2_597 at 673.556 kb on - strand, within Pf6N2E2_597 at 673.556 kb on - strand, within Pf6N2E2_597 at 673.603 kb on - strand, within Pf6N2E2_597 at 673.718 kb on - strand, within Pf6N2E2_597 at 673.718 kb on - strand, within Pf6N2E2_597 at 674.016 kb on - strand, within Pf6N2E2_598 at 674.178 kb on + strand at 674.197 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (N) remove 672,271 - Pf6N2E2_596 0.52 +1.8 672,465 + Pf6N2E2_596 0.68 +0.0 672,465 + Pf6N2E2_596 0.68 +1.4 672,465 + Pf6N2E2_596 0.68 +0.2 672,477 + Pf6N2E2_596 0.68 +2.4 672,507 + Pf6N2E2_596 0.71 -0.8 672,684 + Pf6N2E2_596 0.85 -0.2 672,684 + Pf6N2E2_596 0.85 +1.0 672,684 + Pf6N2E2_596 0.85 +0.7 672,798 + -0.8 672,798 + +0.1 672,801 + -0.6 672,801 + -0.2 672,801 + -0.1 672,801 + +0.5 672,801 + +0.0 672,802 - +0.9 672,802 - +0.2 672,802 - -0.7 672,940 - +2.5 673,048 - -0.2 673,339 + Pf6N2E2_597 0.35 +1.0 673,378 - Pf6N2E2_597 0.39 +1.0 673,536 - Pf6N2E2_597 0.55 -0.4 673,555 + Pf6N2E2_597 0.57 -0.1 673,555 + Pf6N2E2_597 0.57 -0.0 673,556 - Pf6N2E2_597 0.57 +1.1 673,556 - Pf6N2E2_597 0.57 +0.3 673,603 - Pf6N2E2_597 0.62 +0.9 673,718 - Pf6N2E2_597 0.74 -0.2 673,718 - Pf6N2E2_597 0.74 +0.8 674,016 - Pf6N2E2_598 0.20 -0.0 674,178 + +1.1 674,197 + +0.4
Or see this region's nucleotide sequence