Experiment: m.b. Nalidixic 0.032 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_667 and HP15_668 are separated by 1 nucleotides HP15_668 and HP15_669 overlap by 1 nucleotides HP15_669 and HP15_670 are separated by 74 nucleotides HP15_670 and HP15_671 overlap by 23 nucleotides
HP15_667: HP15_667 - prophage LambdaW5, minor tail protein Z-like protein, at 687,260 to 687,802
_667
HP15_668: HP15_668 - conserved hypothetical protein, at 687,804 to 688,115
_668
HP15_669: HP15_669 - protein containing Rho termination factor, N-terminal domain, at 688,115 to 688,414
_669
HP15_670: HP15_670 - peptidase U35, phage prohead, at 688,489 to 690,591
_670
HP15_671: HP15_671 - phage portal protein, lambda family, at 690,569 to 692,146
_671
Position (kb) 688
689
690
691 Strain fitness (log2 ratio) -1
0
1
2
3 at 687.512 kb on - strand, within HP15_667 at 687.519 kb on + strand, within HP15_667 at 687.526 kb on + strand, within HP15_667 at 687.529 kb on - strand, within HP15_667 at 687.544 kb on + strand, within HP15_667 at 687.552 kb on - strand, within HP15_667 at 687.782 kb on - strand at 687.848 kb on + strand, within HP15_668 at 687.867 kb on + strand, within HP15_668 at 687.875 kb on - strand, within HP15_668 at 687.997 kb on - strand, within HP15_668 at 688.048 kb on + strand, within HP15_668 at 688.057 kb on - strand, within HP15_668 at 688.164 kb on - strand, within HP15_669 at 688.196 kb on + strand, within HP15_669 at 688.267 kb on - strand, within HP15_669 at 688.278 kb on + strand, within HP15_669 at 688.325 kb on - strand, within HP15_669 at 688.329 kb on - strand, within HP15_669 at 688.338 kb on + strand, within HP15_669 at 688.461 kb on + strand at 688.469 kb on - strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.608 kb on + strand at 688.616 kb on - strand at 688.616 kb on - strand at 688.689 kb on + strand at 688.766 kb on + strand, within HP15_670 at 688.766 kb on + strand, within HP15_670 at 688.766 kb on + strand, within HP15_670 at 688.799 kb on + strand, within HP15_670 at 688.878 kb on - strand, within HP15_670 at 689.024 kb on - strand, within HP15_670 at 689.088 kb on + strand, within HP15_670 at 689.098 kb on + strand, within HP15_670 at 689.136 kb on + strand, within HP15_670 at 689.143 kb on + strand, within HP15_670 at 689.190 kb on + strand, within HP15_670 at 689.242 kb on + strand, within HP15_670 at 689.285 kb on + strand, within HP15_670 at 689.285 kb on + strand, within HP15_670 at 689.335 kb on + strand, within HP15_670 at 689.447 kb on - strand, within HP15_670 at 689.447 kb on - strand, within HP15_670 at 689.483 kb on + strand, within HP15_670 at 689.516 kb on + strand, within HP15_670 at 689.537 kb on - strand, within HP15_670 at 689.556 kb on - strand, within HP15_670 at 689.651 kb on - strand, within HP15_670 at 689.731 kb on + strand, within HP15_670 at 689.768 kb on + strand, within HP15_670 at 689.776 kb on - strand, within HP15_670 at 689.831 kb on + strand, within HP15_670 at 689.846 kb on + strand, within HP15_670 at 689.854 kb on - strand, within HP15_670 at 690.048 kb on - strand, within HP15_670 at 690.054 kb on - strand, within HP15_670 at 690.147 kb on + strand, within HP15_670 at 690.147 kb on + strand, within HP15_670 at 690.147 kb on + strand, within HP15_670 at 690.155 kb on - strand, within HP15_670 at 690.170 kb on - strand, within HP15_670 at 690.175 kb on - strand, within HP15_670 at 690.230 kb on - strand, within HP15_670 at 690.313 kb on + strand, within HP15_670 at 690.364 kb on - strand, within HP15_670 at 690.533 kb on + strand at 690.652 kb on - strand at 690.734 kb on - strand, within HP15_671 at 690.754 kb on + strand, within HP15_671 at 690.820 kb on + strand, within HP15_671 at 690.921 kb on + strand, within HP15_671 at 690.921 kb on + strand, within HP15_671 at 690.929 kb on - strand, within HP15_671 at 690.931 kb on + strand, within HP15_671 at 690.961 kb on - strand, within HP15_671 at 691.026 kb on + strand, within HP15_671 at 691.080 kb on - strand, within HP15_671 at 691.085 kb on - strand, within HP15_671 at 691.203 kb on - strand, within HP15_671 at 691.210 kb on + strand, within HP15_671 at 691.226 kb on - strand, within HP15_671 at 691.253 kb on + strand, within HP15_671 at 691.254 kb on - strand, within HP15_671 at 691.358 kb on + strand, within HP15_671 at 691.374 kb on + strand, within HP15_671 at 691.413 kb on - strand, within HP15_671
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.032 mg/ml remove 687,512 - HP15_667 0.46 +0.9 687,519 + HP15_667 0.48 +1.1 687,526 + HP15_667 0.49 +0.6 687,529 - HP15_667 0.50 -0.3 687,544 + HP15_667 0.52 +0.7 687,552 - HP15_667 0.54 +0.3 687,782 - -0.1 687,848 + HP15_668 0.14 +0.3 687,867 + HP15_668 0.20 +0.7 687,875 - HP15_668 0.23 +0.5 687,997 - HP15_668 0.62 +0.5 688,048 + HP15_668 0.78 +1.3 688,057 - HP15_668 0.81 +1.3 688,164 - HP15_669 0.16 +0.8 688,196 + HP15_669 0.27 -0.3 688,267 - HP15_669 0.51 +0.9 688,278 + HP15_669 0.54 +0.6 688,325 - HP15_669 0.70 +0.2 688,329 - HP15_669 0.71 +0.4 688,338 + HP15_669 0.74 +1.2 688,461 + +0.1 688,469 - +1.3 688,608 + +0.2 688,608 + -0.5 688,608 + +0.3 688,608 + +0.3 688,608 + -0.9 688,616 - +0.5 688,616 - +0.5 688,689 + -0.1 688,766 + HP15_670 0.13 -0.5 688,766 + HP15_670 0.13 -0.0 688,766 + HP15_670 0.13 +1.0 688,799 + HP15_670 0.15 +0.8 688,878 - HP15_670 0.18 +0.1 689,024 - HP15_670 0.25 +0.5 689,088 + HP15_670 0.28 +0.0 689,098 + HP15_670 0.29 +0.5 689,136 + HP15_670 0.31 -0.1 689,143 + HP15_670 0.31 +1.5 689,190 + HP15_670 0.33 +0.6 689,242 + HP15_670 0.36 +0.2 689,285 + HP15_670 0.38 +1.5 689,285 + HP15_670 0.38 +0.6 689,335 + HP15_670 0.40 +0.7 689,447 - HP15_670 0.46 +1.0 689,447 - HP15_670 0.46 +0.8 689,483 + HP15_670 0.47 +1.0 689,516 + HP15_670 0.49 +0.4 689,537 - HP15_670 0.50 +0.5 689,556 - HP15_670 0.51 +0.9 689,651 - HP15_670 0.55 +0.3 689,731 + HP15_670 0.59 +0.1 689,768 + HP15_670 0.61 +0.2 689,776 - HP15_670 0.61 +0.3 689,831 + HP15_670 0.64 -0.2 689,846 + HP15_670 0.65 +0.7 689,854 - HP15_670 0.65 +0.5 690,048 - HP15_670 0.74 -0.5 690,054 - HP15_670 0.74 -0.2 690,147 + HP15_670 0.79 +0.6 690,147 + HP15_670 0.79 +1.6 690,147 + HP15_670 0.79 -0.3 690,155 - HP15_670 0.79 +1.2 690,170 - HP15_670 0.80 +1.6 690,175 - HP15_670 0.80 -1.2 690,230 - HP15_670 0.83 +0.1 690,313 + HP15_670 0.87 +0.3 690,364 - HP15_670 0.89 +0.5 690,533 + -0.2 690,652 - +0.6 690,734 - HP15_671 0.10 -1.5 690,754 + HP15_671 0.12 +0.2 690,820 + HP15_671 0.16 +0.8 690,921 + HP15_671 0.22 +2.3 690,921 + HP15_671 0.22 +0.7 690,929 - HP15_671 0.23 +0.2 690,931 + HP15_671 0.23 +0.2 690,961 - HP15_671 0.25 +1.2 691,026 + HP15_671 0.29 +0.5 691,080 - HP15_671 0.32 +0.8 691,085 - HP15_671 0.33 +0.4 691,203 - HP15_671 0.40 +0.5 691,210 + HP15_671 0.41 -0.5 691,226 - HP15_671 0.42 +0.6 691,253 + HP15_671 0.43 +0.5 691,254 - HP15_671 0.43 +0.1 691,358 + HP15_671 0.50 +3.2 691,374 + HP15_671 0.51 +1.3 691,413 - HP15_671 0.53 -0.5
Or see this region's nucleotide sequence