Strain Fitness in Desulfovibrio vulgaris Miyazaki F around DvMF_2866

Experiment: MoLS4 minimal media with L-Serine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDvMF_2865 and DvMF_2866 are separated by 303 nucleotidesDvMF_2866 and DvMF_2867 are separated by 410 nucleotides DvMF_2865: DvMF_2865 - hypothetical protein (RefSeq), at 3,618,559 to 3,619,758 _2865 DvMF_2866: DvMF_2866 - hypothetical protein (RefSeq), at 3,620,062 to 3,620,499 _2866 DvMF_2867: DvMF_2867 - protein of unknown function DUF847 (RefSeq), at 3,620,910 to 3,621,488 _2867 Position (kb) 3620 3621Strain fitness (log2 ratio) -1 0 1at 3619.324 kb on - strand, within DvMF_2865at 3619.483 kb on - strand, within DvMF_2865at 3619.516 kb on + strand, within DvMF_2865at 3619.529 kb on - strand, within DvMF_2865at 3619.567 kb on - strand, within DvMF_2865at 3620.136 kb on + strand, within DvMF_2866at 3620.136 kb on + strand, within DvMF_2866at 3620.259 kb on - strand, within DvMF_2866at 3620.400 kb on - strand, within DvMF_2866at 3620.492 kb on - strandat 3620.609 kb on - strandat 3620.682 kb on + strandat 3620.796 kb on - strandat 3620.873 kb on - strandat 3620.889 kb on - strandat 3620.963 kb on - strandat 3621.131 kb on - strand, within DvMF_2867at 3621.213 kb on - strand, within DvMF_2867at 3621.239 kb on + strand, within DvMF_2867at 3621.254 kb on - strand, within DvMF_2867at 3621.293 kb on + strand, within DvMF_2867at 3621.343 kb on - strand, within DvMF_2867

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Per-strain Table

Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine
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3,619,324 - DvMF_2865 0.64 -0.6
3,619,483 - DvMF_2865 0.77 -1.1
3,619,516 + DvMF_2865 0.80 -0.7
3,619,529 - DvMF_2865 0.81 -0.2
3,619,567 - DvMF_2865 0.84 -0.5
3,620,136 + DvMF_2866 0.17 +0.2
3,620,136 + DvMF_2866 0.17 -0.0
3,620,259 - DvMF_2866 0.45 -0.9
3,620,400 - DvMF_2866 0.77 -0.3
3,620,492 - -1.4
3,620,609 - -0.5
3,620,682 + -0.5
3,620,796 - -0.8
3,620,873 - -0.4
3,620,889 - -0.8
3,620,963 - +1.1
3,621,131 - DvMF_2867 0.38 -0.6
3,621,213 - DvMF_2867 0.52 -0.4
3,621,239 + DvMF_2867 0.57 -0.0
3,621,254 - DvMF_2867 0.59 +0.1
3,621,293 + DvMF_2867 0.66 -0.4
3,621,343 - DvMF_2867 0.75 -1.4

Or see this region's nucleotide sequence