Experiment: MoLS4 minimal media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2614 and DvMF_2615 overlap by 4 nucleotides DvMF_2615 and DvMF_2616 are separated by 231 nucleotides DvMF_2616 and DvMF_2617 are separated by 21 nucleotides
DvMF_2614: DvMF_2614 - nitrogen regulatory protein P-II (RefSeq), at 3,303,336 to 3,303,686
_2614
DvMF_2615: DvMF_2615 - nitrogen regulatory protein P-II (RefSeq), at 3,303,683 to 3,304,057
_2615
DvMF_2616: DvMF_2616 - nitrogenase molybdenum-iron protein alpha chain (RefSeq), at 3,304,289 to 3,305,923
_2616
DvMF_2617: DvMF_2617 - nitrogenase molybdenum-iron protein beta chain (RefSeq), at 3,305,945 to 3,307,321
_2617
Position (kb)
3304
3305
3306 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3303.292 kb on + strand at 3303.637 kb on - strand, within DvMF_2614 at 3303.637 kb on - strand, within DvMF_2614 at 3303.681 kb on + strand at 3303.744 kb on - strand, within DvMF_2615 at 3303.790 kb on + strand, within DvMF_2615 at 3303.810 kb on - strand, within DvMF_2615 at 3303.837 kb on + strand, within DvMF_2615 at 3303.912 kb on - strand, within DvMF_2615 at 3303.951 kb on + strand, within DvMF_2615 at 3303.959 kb on - strand, within DvMF_2615 at 3304.102 kb on - strand at 3304.243 kb on + strand at 3304.308 kb on - strand at 3304.311 kb on + strand at 3304.849 kb on + strand, within DvMF_2616 at 3304.857 kb on - strand, within DvMF_2616 at 3305.055 kb on + strand, within DvMF_2616 at 3305.528 kb on - strand, within DvMF_2616 at 3305.534 kb on - strand, within DvMF_2616 at 3305.660 kb on - strand, within DvMF_2616 at 3305.689 kb on + strand, within DvMF_2616 at 3305.740 kb on + strand, within DvMF_2616 at 3305.955 kb on + strand at 3306.110 kb on + strand, within DvMF_2617 at 3306.199 kb on + strand, within DvMF_2617 at 3306.266 kb on - strand, within DvMF_2617 at 3306.296 kb on - strand, within DvMF_2617 at 3306.432 kb on - strand, within DvMF_2617 at 3306.634 kb on - strand, within DvMF_2617 at 3306.634 kb on - strand, within DvMF_2617 at 3306.668 kb on - strand, within DvMF_2617 at 3306.729 kb on + strand, within DvMF_2617 at 3306.739 kb on + strand, within DvMF_2617 at 3306.858 kb on - strand, within DvMF_2617
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine remove 3,303,292 + -3.1 3,303,637 - DvMF_2614 0.86 -0.6 3,303,637 - DvMF_2614 0.86 -0.5 3,303,681 + -0.1 3,303,744 - DvMF_2615 0.16 +0.2 3,303,790 + DvMF_2615 0.29 +0.0 3,303,810 - DvMF_2615 0.34 +0.2 3,303,837 + DvMF_2615 0.41 +1.9 3,303,912 - DvMF_2615 0.61 -0.4 3,303,951 + DvMF_2615 0.71 -1.1 3,303,959 - DvMF_2615 0.74 +1.1 3,304,102 - -0.4 3,304,243 + -0.9 3,304,308 - -0.2 3,304,311 + +0.0 3,304,849 + DvMF_2616 0.34 -0.5 3,304,857 - DvMF_2616 0.35 +0.1 3,305,055 + DvMF_2616 0.47 -0.0 3,305,528 - DvMF_2616 0.76 -0.6 3,305,534 - DvMF_2616 0.76 -1.0 3,305,660 - DvMF_2616 0.84 -0.3 3,305,689 + DvMF_2616 0.86 -0.5 3,305,740 + DvMF_2616 0.89 -0.7 3,305,955 + -0.5 3,306,110 + DvMF_2617 0.12 -0.5 3,306,199 + DvMF_2617 0.18 -0.7 3,306,266 - DvMF_2617 0.23 -0.5 3,306,296 - DvMF_2617 0.25 -0.6 3,306,432 - DvMF_2617 0.35 +0.5 3,306,634 - DvMF_2617 0.50 -0.6 3,306,634 - DvMF_2617 0.50 -0.1 3,306,668 - DvMF_2617 0.53 -0.3 3,306,729 + DvMF_2617 0.57 -0.5 3,306,739 + DvMF_2617 0.58 +0.4 3,306,858 - DvMF_2617 0.66 -0.4
Or see this region's nucleotide sequence