Experiment: MoLS4 minimal media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2315 and DvMF_2316 overlap by 29 nucleotides DvMF_2316 and DvMF_2317 are separated by 42 nucleotides DvMF_2317 and DvMF_2318 overlap by 10 nucleotides
DvMF_2315: DvMF_2315 - Chorismate binding-like protein (RefSeq), at 2,913,768 to 2,915,411
_2315
DvMF_2316: DvMF_2316 - glutamine amidotransferase class-I (RefSeq), at 2,915,383 to 2,916,225
_2316
DvMF_2317: DvMF_2317 - protein of unknown function DUF152 (RefSeq), at 2,916,268 to 2,917,101
_2317
DvMF_2318: DvMF_2318 - 5-formyltetrahydrofolate cyclo-ligase (RefSeq), at 2,917,092 to 2,917,796
_2318
Position (kb)
2915
2916
2917 Strain fitness (log2 ratio)
-2
-1
0
1 at 2914.470 kb on - strand, within DvMF_2315 at 2914.478 kb on + strand, within DvMF_2315 at 2914.514 kb on + strand, within DvMF_2315 at 2914.566 kb on + strand, within DvMF_2315 at 2914.757 kb on + strand, within DvMF_2315 at 2914.757 kb on + strand, within DvMF_2315 at 2914.843 kb on - strand, within DvMF_2315 at 2915.109 kb on - strand, within DvMF_2315 at 2915.174 kb on + strand, within DvMF_2315 at 2915.261 kb on + strand at 2915.360 kb on - strand at 2915.364 kb on + strand at 2915.585 kb on - strand, within DvMF_2316 at 2915.669 kb on + strand, within DvMF_2316 at 2915.693 kb on - strand, within DvMF_2316 at 2915.699 kb on - strand, within DvMF_2316 at 2916.045 kb on + strand, within DvMF_2316 at 2916.076 kb on - strand, within DvMF_2316 at 2916.237 kb on - strand at 2916.255 kb on + strand at 2916.360 kb on + strand, within DvMF_2317 at 2916.469 kb on + strand, within DvMF_2317 at 2916.516 kb on + strand, within DvMF_2317 at 2916.522 kb on + strand, within DvMF_2317 at 2916.522 kb on + strand, within DvMF_2317 at 2916.524 kb on - strand, within DvMF_2317 at 2916.530 kb on - strand, within DvMF_2317 at 2916.555 kb on + strand, within DvMF_2317 at 2916.705 kb on + strand, within DvMF_2317 at 2916.793 kb on - strand, within DvMF_2317 at 2916.859 kb on + strand, within DvMF_2317 at 2916.979 kb on - strand, within DvMF_2317 at 2917.098 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine remove 2,914,470 - DvMF_2315 0.43 +0.0 2,914,478 + DvMF_2315 0.43 +0.1 2,914,514 + DvMF_2315 0.45 -0.2 2,914,566 + DvMF_2315 0.49 -1.1 2,914,757 + DvMF_2315 0.60 -1.0 2,914,757 + DvMF_2315 0.60 -0.4 2,914,843 - DvMF_2315 0.65 -1.0 2,915,109 - DvMF_2315 0.82 -0.3 2,915,174 + DvMF_2315 0.86 -0.3 2,915,261 + -1.1 2,915,360 - -0.6 2,915,364 + -1.0 2,915,585 - DvMF_2316 0.24 -0.7 2,915,669 + DvMF_2316 0.34 -0.9 2,915,693 - DvMF_2316 0.37 -0.6 2,915,699 - DvMF_2316 0.37 -1.4 2,916,045 + DvMF_2316 0.79 -0.5 2,916,076 - DvMF_2316 0.82 -0.6 2,916,237 - -0.1 2,916,255 + -0.8 2,916,360 + DvMF_2317 0.11 -0.2 2,916,469 + DvMF_2317 0.24 -2.3 2,916,516 + DvMF_2317 0.30 -0.1 2,916,522 + DvMF_2317 0.30 -0.3 2,916,522 + DvMF_2317 0.30 +0.5 2,916,524 - DvMF_2317 0.31 -0.3 2,916,530 - DvMF_2317 0.31 +0.4 2,916,555 + DvMF_2317 0.34 -0.4 2,916,705 + DvMF_2317 0.52 -0.1 2,916,793 - DvMF_2317 0.63 +0.5 2,916,859 + DvMF_2317 0.71 -0.4 2,916,979 - DvMF_2317 0.85 -0.4 2,917,098 - -1.1
Or see this region's nucleotide sequence