Experiment: MoLS4 minimal media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1866 and DvMF_1867 are separated by 136 nucleotides DvMF_1867 and DvMF_1868 are separated by 4 nucleotides DvMF_1868 and DvMF_1869 are separated by 235 nucleotides
DvMF_1866: DvMF_1866 - DRTGG domain protein (RefSeq), at 2,290,169 to 2,291,230
_1866
DvMF_1867: DvMF_1867 - protein of unknown function DUF162 (RefSeq), at 2,291,367 to 2,291,996
_1867
DvMF_1868: DvMF_1868 - protein of unknown function DUF162 (RefSeq), at 2,292,001 to 2,294,151
_1868
DvMF_1869: DvMF_1869 - methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq), at 2,294,387 to 2,296,210
_1869
Position (kb)
2292
2293
2294
2295 Strain fitness (log2 ratio)
-2
-1
0
1 at 2291.130 kb on + strand at 2291.138 kb on - strand at 2291.149 kb on + strand at 2291.369 kb on - strand at 2291.369 kb on - strand at 2291.537 kb on + strand, within DvMF_1867 at 2291.544 kb on + strand, within DvMF_1867 at 2291.563 kb on - strand, within DvMF_1867 at 2291.950 kb on - strand at 2292.084 kb on - strand at 2292.213 kb on + strand at 2292.221 kb on - strand, within DvMF_1868 at 2292.221 kb on - strand, within DvMF_1868 at 2292.338 kb on - strand, within DvMF_1868 at 2292.386 kb on + strand, within DvMF_1868 at 2292.736 kb on + strand, within DvMF_1868 at 2293.011 kb on - strand, within DvMF_1868 at 2293.224 kb on - strand, within DvMF_1868 at 2293.292 kb on + strand, within DvMF_1868 at 2293.481 kb on - strand, within DvMF_1868 at 2293.640 kb on + strand, within DvMF_1868 at 2293.640 kb on + strand, within DvMF_1868 at 2293.648 kb on - strand, within DvMF_1868 at 2293.990 kb on + strand at 2293.997 kb on + strand at 2293.998 kb on - strand at 2294.291 kb on - strand at 2294.348 kb on + strand at 2294.788 kb on + strand, within DvMF_1869 at 2294.928 kb on + strand, within DvMF_1869 at 2295.004 kb on + strand, within DvMF_1869
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine remove 2,291,130 + -0.8 2,291,138 - -1.6 2,291,149 + -0.5 2,291,369 - -1.3 2,291,369 - -0.2 2,291,537 + DvMF_1867 0.27 -0.9 2,291,544 + DvMF_1867 0.28 -1.1 2,291,563 - DvMF_1867 0.31 -0.5 2,291,950 - -2.3 2,292,084 - -0.4 2,292,213 + -0.9 2,292,221 - DvMF_1868 0.10 -1.5 2,292,221 - DvMF_1868 0.10 -1.3 2,292,338 - DvMF_1868 0.16 -1.2 2,292,386 + DvMF_1868 0.18 -0.7 2,292,736 + DvMF_1868 0.34 -1.9 2,293,011 - DvMF_1868 0.47 -1.0 2,293,224 - DvMF_1868 0.57 -0.7 2,293,292 + DvMF_1868 0.60 -0.8 2,293,481 - DvMF_1868 0.69 -0.2 2,293,640 + DvMF_1868 0.76 -0.8 2,293,640 + DvMF_1868 0.76 +0.0 2,293,648 - DvMF_1868 0.77 +0.3 2,293,990 + -1.0 2,293,997 + -1.2 2,293,998 - -1.2 2,294,291 - -0.2 2,294,348 + -0.5 2,294,788 + DvMF_1869 0.22 +0.8 2,294,928 + DvMF_1869 0.30 -0.1 2,295,004 + DvMF_1869 0.34 +0.4
Or see this region's nucleotide sequence