Experiment: MoLS4 minimal media with L-Serine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1639 and DvMF_1640 are separated by 38 nucleotides DvMF_1640 and DvMF_1641 are separated by 79 nucleotides DvMF_1641 and DvMF_1642 are separated by 2 nucleotides
DvMF_1639: DvMF_1639 - Phage-related protein tail component-like protein (RefSeq), at 2,018,379 to 2,021,135
_1639
DvMF_1640: DvMF_1640 - hypothetical protein (RefSeq), at 2,021,174 to 2,021,533
_1640
DvMF_1641: DvMF_1641 - hypothetical protein (RefSeq), at 2,021,613 to 2,022,518
_1641
DvMF_1642: DvMF_1642 - hypothetical protein (RefSeq), at 2,022,521 to 2,022,874
_1642
Position (kb)
2021
2022 Strain fitness (log2 ratio)
-1
0
1 at 2020.196 kb on + strand, within DvMF_1639 at 2020.249 kb on - strand, within DvMF_1639 at 2020.254 kb on - strand, within DvMF_1639 at 2020.259 kb on - strand, within DvMF_1639 at 2020.396 kb on + strand, within DvMF_1639 at 2020.550 kb on - strand, within DvMF_1639 at 2020.573 kb on + strand, within DvMF_1639 at 2020.592 kb on + strand, within DvMF_1639 at 2020.600 kb on - strand, within DvMF_1639 at 2020.728 kb on - strand, within DvMF_1639 at 2020.826 kb on - strand, within DvMF_1639 at 2020.918 kb on + strand at 2020.981 kb on - strand at 2020.981 kb on - strand at 2021.008 kb on - strand at 2021.008 kb on - strand at 2021.034 kb on + strand at 2021.073 kb on - strand at 2021.148 kb on + strand at 2021.214 kb on - strand, within DvMF_1640 at 2021.346 kb on - strand, within DvMF_1640 at 2021.346 kb on - strand, within DvMF_1640 at 2021.374 kb on - strand, within DvMF_1640 at 2021.400 kb on + strand, within DvMF_1640 at 2021.462 kb on + strand, within DvMF_1640 at 2021.470 kb on - strand, within DvMF_1640 at 2021.509 kb on + strand at 2021.682 kb on - strand at 2021.810 kb on + strand, within DvMF_1641 at 2021.833 kb on - strand, within DvMF_1641 at 2021.904 kb on - strand, within DvMF_1641 at 2022.016 kb on + strand, within DvMF_1641 at 2022.024 kb on - strand, within DvMF_1641 at 2022.120 kb on + strand, within DvMF_1641 at 2022.138 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.175 kb on - strand, within DvMF_1641 at 2022.186 kb on - strand, within DvMF_1641 at 2022.238 kb on - strand, within DvMF_1641 at 2022.258 kb on + strand, within DvMF_1641 at 2022.311 kb on - strand, within DvMF_1641 at 2022.334 kb on - strand, within DvMF_1641 at 2022.461 kb on + strand at 2022.514 kb on + strand at 2022.522 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Serine remove 2,020,196 + DvMF_1639 0.66 -0.5 2,020,249 - DvMF_1639 0.68 +0.1 2,020,254 - DvMF_1639 0.68 -0.7 2,020,259 - DvMF_1639 0.68 -0.1 2,020,396 + DvMF_1639 0.73 -0.3 2,020,550 - DvMF_1639 0.79 +0.6 2,020,573 + DvMF_1639 0.80 +0.7 2,020,592 + DvMF_1639 0.80 -0.2 2,020,600 - DvMF_1639 0.81 -0.1 2,020,728 - DvMF_1639 0.85 -0.4 2,020,826 - DvMF_1639 0.89 -0.3 2,020,918 + -0.8 2,020,981 - -0.2 2,020,981 - -0.3 2,021,008 - -0.0 2,021,008 - +0.1 2,021,034 + -0.1 2,021,073 - -0.9 2,021,148 + -0.3 2,021,214 - DvMF_1640 0.11 -0.0 2,021,346 - DvMF_1640 0.48 -0.1 2,021,346 - DvMF_1640 0.48 -0.4 2,021,374 - DvMF_1640 0.56 +0.0 2,021,400 + DvMF_1640 0.63 +1.2 2,021,462 + DvMF_1640 0.80 +1.1 2,021,470 - DvMF_1640 0.82 +0.4 2,021,509 + -0.4 2,021,682 - -0.2 2,021,810 + DvMF_1641 0.22 +0.5 2,021,833 - DvMF_1641 0.24 -0.0 2,021,904 - DvMF_1641 0.32 -0.3 2,022,016 + DvMF_1641 0.44 -0.1 2,022,024 - DvMF_1641 0.45 -0.6 2,022,120 + DvMF_1641 0.56 -0.3 2,022,138 - DvMF_1641 0.58 -0.1 2,022,175 - DvMF_1641 0.62 -0.5 2,022,175 - DvMF_1641 0.62 -0.1 2,022,175 - DvMF_1641 0.62 -0.3 2,022,186 - DvMF_1641 0.63 +0.2 2,022,238 - DvMF_1641 0.69 -0.5 2,022,258 + DvMF_1641 0.71 -1.4 2,022,311 - DvMF_1641 0.77 -0.4 2,022,334 - DvMF_1641 0.80 +0.7 2,022,461 + -0.4 2,022,514 + +0.1 2,022,522 - +0.1
Or see this region's nucleotide sequence