Experiment: D-Glucose 2 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS15945 and BWI76_RS15950 overlap by 48 nucleotides BWI76_RS15950 and BWI76_RS15955 are separated by 127 nucleotides BWI76_RS15955 and BWI76_RS15960 are separated by 133 nucleotides
BWI76_RS15945: BWI76_RS15945 - voltage-gated ClC-type chloride channel ClcB, at 3,306,971 to 3,308,266
_RS15945
BWI76_RS15950: BWI76_RS15950 - dethiobiotin synthase, at 3,308,219 to 3,308,914
_RS15950
BWI76_RS15955: BWI76_RS15955 - transcriptional regulator, at 3,309,042 to 3,310,262
_RS15955
BWI76_RS15960: BWI76_RS15960 - LysR family transcriptional regulator, at 3,310,396 to 3,311,289
_RS15960
Position (kb)
3309
3310
3311 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3308.117 kb on - strand, within BWI76_RS15945 at 3308.662 kb on - strand, within BWI76_RS15950 at 3308.806 kb on + strand, within BWI76_RS15950 at 3308.846 kb on - strand at 3309.001 kb on + strand at 3309.088 kb on + strand at 3309.088 kb on + strand at 3309.093 kb on + strand at 3309.101 kb on - strand at 3309.235 kb on - strand, within BWI76_RS15955 at 3309.236 kb on - strand, within BWI76_RS15955 at 3309.514 kb on + strand, within BWI76_RS15955 at 3309.600 kb on + strand, within BWI76_RS15955 at 3309.970 kb on - strand, within BWI76_RS15955 at 3310.318 kb on - strand at 3310.856 kb on - strand, within BWI76_RS15960 at 3310.865 kb on + strand, within BWI76_RS15960 at 3310.865 kb on + strand, within BWI76_RS15960 at 3310.923 kb on + strand, within BWI76_RS15960 at 3311.214 kb on - strand at 3311.239 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 2 mM (C) remove 3,308,117 - BWI76_RS15945 0.88 -0.2 3,308,662 - BWI76_RS15950 0.64 +0.1 3,308,806 + BWI76_RS15950 0.84 -0.3 3,308,846 - +0.6 3,309,001 + +0.7 3,309,088 + -2.2 3,309,088 + -2.0 3,309,093 + +0.9 3,309,101 - -0.0 3,309,235 - BWI76_RS15955 0.16 -0.7 3,309,236 - BWI76_RS15955 0.16 -1.3 3,309,514 + BWI76_RS15955 0.39 -0.8 3,309,600 + BWI76_RS15955 0.46 -3.0 3,309,970 - BWI76_RS15955 0.76 -0.8 3,310,318 - +0.1 3,310,856 - BWI76_RS15960 0.51 +0.1 3,310,865 + BWI76_RS15960 0.52 -0.2 3,310,865 + BWI76_RS15960 0.52 -0.6 3,310,923 + BWI76_RS15960 0.59 -0.7 3,311,214 - +1.4 3,311,239 + -0.1
Or see this region's nucleotide sequence