Experiment: D-Glucose 2 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS10800 and BWI76_RS10805 are separated by 112 nucleotides BWI76_RS10805 and BWI76_RS10810 are separated by 69 nucleotides BWI76_RS10810 and BWI76_RS10815 are separated by 273 nucleotides
BWI76_RS10800: BWI76_RS10800 - sodium:proline symporter, at 2,281,830 to 2,283,338
_RS10800
BWI76_RS10805: BWI76_RS10805 - hypothetical protein, at 2,283,451 to 2,283,885
_RS10805
BWI76_RS10810: BWI76_RS10810 - NupC family nucleoside transporter, at 2,283,955 to 2,285,139
_RS10810
BWI76_RS10815: BWI76_RS10815 - iron permease, at 2,285,413 to 2,286,243
_RS10815
Position (kb)
2283
2284
2285
2286 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2282.981 kb on + strand, within BWI76_RS10800 at 2282.989 kb on - strand, within BWI76_RS10800 at 2283.338 kb on + strand at 2283.514 kb on - strand, within BWI76_RS10805 at 2283.557 kb on - strand, within BWI76_RS10805 at 2283.810 kb on + strand, within BWI76_RS10805 at 2283.864 kb on + strand at 2283.928 kb on - strand at 2283.997 kb on - strand at 2284.002 kb on - strand at 2284.007 kb on - strand at 2284.015 kb on - strand at 2284.065 kb on - strand at 2284.072 kb on - strand at 2284.103 kb on - strand, within BWI76_RS10810 at 2284.149 kb on + strand, within BWI76_RS10810 at 2284.252 kb on - strand, within BWI76_RS10810 at 2284.278 kb on + strand, within BWI76_RS10810 at 2284.300 kb on - strand, within BWI76_RS10810 at 2284.351 kb on + strand, within BWI76_RS10810 at 2284.359 kb on - strand, within BWI76_RS10810 at 2284.421 kb on - strand, within BWI76_RS10810 at 2284.450 kb on - strand, within BWI76_RS10810 at 2284.476 kb on + strand, within BWI76_RS10810 at 2284.481 kb on + strand, within BWI76_RS10810 at 2284.481 kb on - strand, within BWI76_RS10810 at 2284.484 kb on - strand, within BWI76_RS10810 at 2284.484 kb on - strand, within BWI76_RS10810 at 2284.486 kb on + strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.494 kb on - strand, within BWI76_RS10810 at 2284.518 kb on + strand, within BWI76_RS10810 at 2284.526 kb on + strand at 2284.526 kb on - strand, within BWI76_RS10810 at 2284.590 kb on - strand, within BWI76_RS10810 at 2284.671 kb on + strand, within BWI76_RS10810 at 2284.693 kb on - strand, within BWI76_RS10810 at 2284.737 kb on - strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.751 kb on + strand, within BWI76_RS10810 at 2284.758 kb on + strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.759 kb on - strand, within BWI76_RS10810 at 2284.772 kb on + strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.780 kb on - strand, within BWI76_RS10810 at 2284.810 kb on + strand, within BWI76_RS10810 at 2284.813 kb on - strand, within BWI76_RS10810 at 2284.818 kb on - strand, within BWI76_RS10810 at 2284.845 kb on - strand, within BWI76_RS10810 at 2284.884 kb on + strand, within BWI76_RS10810 at 2284.894 kb on + strand, within BWI76_RS10810 at 2285.017 kb on - strand, within BWI76_RS10810 at 2285.081 kb on + strand at 2285.091 kb on + strand at 2285.128 kb on + strand at 2285.130 kb on - strand at 2285.183 kb on - strand at 2285.188 kb on - strand at 2285.223 kb on + strand at 2285.231 kb on - strand at 2285.237 kb on + strand at 2285.237 kb on + strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.245 kb on - strand at 2285.566 kb on - strand, within BWI76_RS10815 at 2285.663 kb on + strand, within BWI76_RS10815 at 2285.812 kb on - strand, within BWI76_RS10815 at 2286.017 kb on + strand, within BWI76_RS10815
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose 2 mM (C) remove 2,282,981 + BWI76_RS10800 0.76 -1.1 2,282,989 - BWI76_RS10800 0.77 +0.5 2,283,338 + +0.1 2,283,514 - BWI76_RS10805 0.14 +0.2 2,283,557 - BWI76_RS10805 0.24 +0.7 2,283,810 + BWI76_RS10805 0.83 -0.3 2,283,864 + -0.2 2,283,928 - +0.2 2,283,997 - +1.3 2,284,002 - +0.0 2,284,007 - -0.8 2,284,015 - -0.5 2,284,065 - +0.6 2,284,072 - -0.3 2,284,103 - BWI76_RS10810 0.12 +0.3 2,284,149 + BWI76_RS10810 0.16 -1.4 2,284,252 - BWI76_RS10810 0.25 +0.8 2,284,278 + BWI76_RS10810 0.27 +0.0 2,284,300 - BWI76_RS10810 0.29 +0.1 2,284,351 + BWI76_RS10810 0.33 +0.7 2,284,359 - BWI76_RS10810 0.34 +0.4 2,284,421 - BWI76_RS10810 0.39 +0.4 2,284,450 - BWI76_RS10810 0.42 -0.0 2,284,476 + BWI76_RS10810 0.44 +0.4 2,284,481 + BWI76_RS10810 0.44 -0.9 2,284,481 - BWI76_RS10810 0.44 -0.3 2,284,484 - BWI76_RS10810 0.45 +0.1 2,284,484 - BWI76_RS10810 0.45 -0.2 2,284,486 + BWI76_RS10810 0.45 +1.1 2,284,494 - BWI76_RS10810 0.45 +0.2 2,284,494 - BWI76_RS10810 0.45 -1.2 2,284,494 - BWI76_RS10810 0.45 -1.3 2,284,494 - BWI76_RS10810 0.45 +0.6 2,284,494 - BWI76_RS10810 0.45 +0.1 2,284,494 - BWI76_RS10810 0.45 -0.7 2,284,518 + BWI76_RS10810 0.48 -0.0 2,284,526 + -0.4 2,284,526 - BWI76_RS10810 0.48 +0.4 2,284,590 - BWI76_RS10810 0.54 -0.6 2,284,671 + BWI76_RS10810 0.60 +0.2 2,284,693 - BWI76_RS10810 0.62 -0.4 2,284,737 - BWI76_RS10810 0.66 -0.6 2,284,751 + BWI76_RS10810 0.67 +1.9 2,284,751 + BWI76_RS10810 0.67 +0.2 2,284,751 + BWI76_RS10810 0.67 -0.0 2,284,751 + BWI76_RS10810 0.67 +0.3 2,284,758 + BWI76_RS10810 0.68 +0.2 2,284,759 - BWI76_RS10810 0.68 -0.6 2,284,759 - BWI76_RS10810 0.68 +0.3 2,284,759 - BWI76_RS10810 0.68 +0.1 2,284,759 - BWI76_RS10810 0.68 +0.5 2,284,759 - BWI76_RS10810 0.68 +0.2 2,284,759 - BWI76_RS10810 0.68 +0.5 2,284,759 - BWI76_RS10810 0.68 +0.1 2,284,759 - BWI76_RS10810 0.68 -0.5 2,284,759 - BWI76_RS10810 0.68 -0.3 2,284,772 + BWI76_RS10810 0.69 -0.7 2,284,780 - BWI76_RS10810 0.70 -1.0 2,284,780 - BWI76_RS10810 0.70 +0.3 2,284,780 - BWI76_RS10810 0.70 +0.3 2,284,780 - BWI76_RS10810 0.70 +0.3 2,284,780 - BWI76_RS10810 0.70 -0.4 2,284,810 + BWI76_RS10810 0.72 -0.4 2,284,813 - BWI76_RS10810 0.72 +1.2 2,284,818 - BWI76_RS10810 0.73 -0.1 2,284,845 - BWI76_RS10810 0.75 -0.8 2,284,884 + BWI76_RS10810 0.78 -0.5 2,284,894 + BWI76_RS10810 0.79 +0.2 2,285,017 - BWI76_RS10810 0.90 +0.2 2,285,081 + -2.0 2,285,091 + +0.6 2,285,128 + -0.7 2,285,130 - -1.3 2,285,183 - +0.7 2,285,188 - -0.3 2,285,223 + -0.0 2,285,231 - -0.2 2,285,237 + +0.1 2,285,237 + -0.0 2,285,245 - -0.6 2,285,245 - +0.1 2,285,245 - -0.5 2,285,245 - +0.3 2,285,245 - -0.4 2,285,566 - BWI76_RS10815 0.18 +0.4 2,285,663 + BWI76_RS10815 0.30 +0.1 2,285,812 - BWI76_RS10815 0.48 -0.2 2,286,017 + BWI76_RS10815 0.73 -1.1
Or see this region's nucleotide sequence