Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2944 and DvMF_2945 are separated by 151 nucleotides DvMF_2945 and DvMF_2946 are separated by 145 nucleotides DvMF_2946 and DvMF_2947 are separated by 21 nucleotides DvMF_2947 and DvMF_2948 are separated by 227 nucleotides
DvMF_2944: DvMF_2944 - hypothetical protein (RefSeq), at 3,715,860 to 3,716,942
_2944
DvMF_2945: DvMF_2945 - Cupin 2 conserved barrel domain protein (RefSeq), at 3,717,094 to 3,717,591
_2945
DvMF_2946: DvMF_2946 - hypothetical protein (RefSeq), at 3,717,737 to 3,718,792
_2946
DvMF_2947: DvMF_2947 - Carboxymuconolactone decarboxylase (RefSeq), at 3,718,814 to 3,719,548
_2947
DvMF_2948: DvMF_2948 - transcriptional regulator, AraC family (RefSeq), at 3,719,776 to 3,720,675
_2948
Position (kb)
3717
3718
3719 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3716.745 kb on + strand, within DvMF_2944 at 3716.824 kb on - strand, within DvMF_2944 at 3716.839 kb on - strand at 3717.074 kb on - strand at 3717.106 kb on + strand at 3717.357 kb on + strand, within DvMF_2945 at 3717.357 kb on + strand, within DvMF_2945 at 3717.417 kb on - strand, within DvMF_2945 at 3717.424 kb on + strand, within DvMF_2945 at 3717.458 kb on + strand, within DvMF_2945 at 3717.603 kb on + strand at 3718.037 kb on + strand, within DvMF_2946 at 3718.041 kb on - strand, within DvMF_2946 at 3718.184 kb on + strand, within DvMF_2946 at 3718.308 kb on - strand, within DvMF_2946 at 3718.328 kb on - strand, within DvMF_2946 at 3718.704 kb on - strand at 3718.970 kb on + strand, within DvMF_2947 at 3718.978 kb on - strand, within DvMF_2947 at 3718.994 kb on + strand, within DvMF_2947 at 3719.049 kb on - strand, within DvMF_2947 at 3719.113 kb on - strand, within DvMF_2947 at 3719.125 kb on - strand, within DvMF_2947 at 3719.126 kb on - strand, within DvMF_2947 at 3719.187 kb on + strand, within DvMF_2947 at 3719.250 kb on - strand, within DvMF_2947 at 3719.670 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 3,716,745 + DvMF_2944 0.82 -1.6 3,716,824 - DvMF_2944 0.89 -1.4 3,716,839 - -1.6 3,717,074 - -0.1 3,717,106 + +1.2 3,717,357 + DvMF_2945 0.53 +0.1 3,717,357 + DvMF_2945 0.53 +0.7 3,717,417 - DvMF_2945 0.65 -1.3 3,717,424 + DvMF_2945 0.66 -0.9 3,717,458 + DvMF_2945 0.73 +0.5 3,717,603 + +0.6 3,718,037 + DvMF_2946 0.28 -1.1 3,718,041 - DvMF_2946 0.29 -3.7 3,718,184 + DvMF_2946 0.42 -1.2 3,718,308 - DvMF_2946 0.54 -0.8 3,718,328 - DvMF_2946 0.56 -1.1 3,718,704 - -1.0 3,718,970 + DvMF_2947 0.21 +0.3 3,718,978 - DvMF_2947 0.22 -0.5 3,718,994 + DvMF_2947 0.24 -1.0 3,719,049 - DvMF_2947 0.32 +0.5 3,719,113 - DvMF_2947 0.41 +0.7 3,719,125 - DvMF_2947 0.42 -0.9 3,719,126 - DvMF_2947 0.42 +0.9 3,719,187 + DvMF_2947 0.51 -1.2 3,719,250 - DvMF_2947 0.59 -1.5 3,719,670 + -0.5
Or see this region's nucleotide sequence