Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2531 and DvMF_2532 are separated by 58 nucleotides DvMF_2532 and DvMF_2533 are separated by 323 nucleotides
DvMF_2531: DvMF_2531 - cytochrome bd-type quinol oxidase subunit 1-like protein (RefSeq), at 3,193,053 to 3,194,360
_2531
DvMF_2532: DvMF_2532 - cytochrome c class III (RefSeq), at 3,194,419 to 3,196,350
_2532
DvMF_2533: DvMF_2533 - formate dehydrogenase, alpha subunit (RefSeq), at 3,196,674 to 3,199,706
_2533
Position (kb)
3194
3195
3196
3197 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3193.492 kb on - strand, within DvMF_2531 at 3193.533 kb on - strand, within DvMF_2531 at 3193.801 kb on - strand, within DvMF_2531 at 3193.803 kb on - strand, within DvMF_2531 at 3193.828 kb on - strand, within DvMF_2531 at 3193.841 kb on - strand, within DvMF_2531 at 3193.915 kb on - strand, within DvMF_2531 at 3193.955 kb on + strand, within DvMF_2531 at 3194.238 kb on - strand at 3194.564 kb on - strand at 3194.815 kb on + strand, within DvMF_2532 at 3194.815 kb on + strand, within DvMF_2532 at 3194.815 kb on + strand, within DvMF_2532 at 3194.823 kb on - strand, within DvMF_2532 at 3194.949 kb on + strand, within DvMF_2532 at 3195.079 kb on - strand, within DvMF_2532 at 3195.080 kb on - strand, within DvMF_2532 at 3195.156 kb on - strand, within DvMF_2532 at 3195.261 kb on - strand, within DvMF_2532 at 3195.277 kb on + strand, within DvMF_2532 at 3195.307 kb on + strand, within DvMF_2532 at 3195.529 kb on + strand, within DvMF_2532 at 3195.537 kb on - strand, within DvMF_2532 at 3196.009 kb on - strand, within DvMF_2532 at 3196.035 kb on + strand, within DvMF_2532 at 3196.152 kb on - strand, within DvMF_2532 at 3196.296 kb on + strand at 3196.361 kb on - strand at 3196.445 kb on - strand at 3196.761 kb on - strand at 3196.761 kb on - strand at 3196.821 kb on - strand at 3196.853 kb on + strand at 3197.160 kb on - strand, within DvMF_2533 at 3197.193 kb on + strand, within DvMF_2533
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 3,193,492 - DvMF_2531 0.34 -0.4 3,193,533 - DvMF_2531 0.37 -0.4 3,193,801 - DvMF_2531 0.57 -0.5 3,193,803 - DvMF_2531 0.57 -0.3 3,193,828 - DvMF_2531 0.59 +1.1 3,193,841 - DvMF_2531 0.60 -0.3 3,193,915 - DvMF_2531 0.66 -0.7 3,193,955 + DvMF_2531 0.69 -0.8 3,194,238 - +0.0 3,194,564 - -0.4 3,194,815 + DvMF_2532 0.20 -0.2 3,194,815 + DvMF_2532 0.20 +0.1 3,194,815 + DvMF_2532 0.20 -0.2 3,194,823 - DvMF_2532 0.21 +0.5 3,194,949 + DvMF_2532 0.27 -1.0 3,195,079 - DvMF_2532 0.34 -0.2 3,195,080 - DvMF_2532 0.34 -1.0 3,195,156 - DvMF_2532 0.38 -2.3 3,195,261 - DvMF_2532 0.44 -0.9 3,195,277 + DvMF_2532 0.44 -3.4 3,195,307 + DvMF_2532 0.46 -0.8 3,195,529 + DvMF_2532 0.57 -1.5 3,195,537 - DvMF_2532 0.58 -0.1 3,196,009 - DvMF_2532 0.82 -0.7 3,196,035 + DvMF_2532 0.84 -0.4 3,196,152 - DvMF_2532 0.90 -1.5 3,196,296 + +0.2 3,196,361 - -2.9 3,196,445 - +1.1 3,196,761 - -1.0 3,196,761 - -0.5 3,196,821 - -0.8 3,196,853 + -1.4 3,197,160 - DvMF_2533 0.16 -0.8 3,197,193 + DvMF_2533 0.17 +0.5
Or see this region's nucleotide sequence