Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2062 and DvMF_2063 are separated by 268 nucleotides DvMF_2063 and DvMF_2064 are separated by 173 nucleotides DvMF_2064 and DvMF_2065 are separated by 227 nucleotides
DvMF_2062: DvMF_2062 - ABC transporter related (RefSeq), at 2,557,436 to 2,558,158
_2062
DvMF_2063: DvMF_2063 - protein of unknown function DUF214 (RefSeq), at 2,558,427 to 2,559,620
_2063
DvMF_2064: DvMF_2064 - hypothetical protein (RefSeq), at 2,559,794 to 2,560,255
_2064
DvMF_2065: DvMF_2065 - ybaK/ebsC protein (RefSeq), at 2,560,483 to 2,560,947
_2065
Position (kb)
2558
2559
2560 Strain fitness (log2 ratio)
-1
0
1 at 2557.485 kb on - strand at 2557.525 kb on - strand, within DvMF_2062 at 2557.529 kb on + strand, within DvMF_2062 at 2557.594 kb on + strand, within DvMF_2062 at 2557.632 kb on + strand, within DvMF_2062 at 2557.657 kb on - strand, within DvMF_2062 at 2557.664 kb on + strand, within DvMF_2062 at 2557.771 kb on + strand, within DvMF_2062 at 2557.962 kb on + strand, within DvMF_2062 at 2558.154 kb on - strand at 2558.558 kb on + strand, within DvMF_2063 at 2558.585 kb on - strand, within DvMF_2063 at 2558.654 kb on - strand, within DvMF_2063 at 2558.758 kb on - strand, within DvMF_2063 at 2558.841 kb on - strand, within DvMF_2063 at 2558.866 kb on + strand, within DvMF_2063 at 2558.866 kb on + strand, within DvMF_2063 at 2558.874 kb on - strand, within DvMF_2063 at 2558.959 kb on - strand, within DvMF_2063 at 2559.210 kb on + strand, within DvMF_2063 at 2559.270 kb on - strand, within DvMF_2063 at 2559.614 kb on - strand at 2559.924 kb on + strand, within DvMF_2064 at 2559.983 kb on - strand, within DvMF_2064 at 2560.352 kb on - strand at 2560.401 kb on - strand at 2560.512 kb on + strand at 2560.608 kb on - strand, within DvMF_2065
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 2,557,485 - -0.3 2,557,525 - DvMF_2062 0.12 -1.4 2,557,529 + DvMF_2062 0.13 -0.7 2,557,594 + DvMF_2062 0.22 -1.3 2,557,632 + DvMF_2062 0.27 -0.9 2,557,657 - DvMF_2062 0.31 -0.8 2,557,664 + DvMF_2062 0.32 +0.4 2,557,771 + DvMF_2062 0.46 -1.0 2,557,962 + DvMF_2062 0.73 -0.2 2,558,154 - -1.4 2,558,558 + DvMF_2063 0.11 +0.1 2,558,585 - DvMF_2063 0.13 -0.8 2,558,654 - DvMF_2063 0.19 -0.1 2,558,758 - DvMF_2063 0.28 -0.3 2,558,841 - DvMF_2063 0.35 -0.7 2,558,866 + DvMF_2063 0.37 +0.9 2,558,866 + DvMF_2063 0.37 +0.6 2,558,874 - DvMF_2063 0.37 -0.3 2,558,959 - DvMF_2063 0.45 +0.3 2,559,210 + DvMF_2063 0.66 +1.1 2,559,270 - DvMF_2063 0.71 -1.1 2,559,614 - -0.8 2,559,924 + DvMF_2064 0.28 -0.1 2,559,983 - DvMF_2064 0.41 -0.9 2,560,352 - +1.0 2,560,401 - -1.4 2,560,512 + -0.3 2,560,608 - DvMF_2065 0.27 -0.3
Or see this region's nucleotide sequence