Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_2058 and DvMF_2059 are separated by 281 nucleotides DvMF_2059 and DvMF_2060 are separated by 377 nucleotides DvMF_2060 and DvMF_2061 overlap by 4 nucleotides
DvMF_2058: DvMF_2058 - putative superfamily I DNA and RNA helicase protein (RefSeq), at 2,549,908 to 2,555,493
_2058
DvMF_2059: DvMF_2059 - hypothetical protein (RefSeq), at 2,555,775 to 2,556,065
_2059
DvMF_2060: DvMF_2060 - small multidrug resistance protein (RefSeq), at 2,556,443 to 2,556,850
_2060
DvMF_2061: DvMF_2061 - small multidrug resistance protein (RefSeq), at 2,556,847 to 2,557,176
_2061
Position (kb)
2555
2556
2557 Strain fitness (log2 ratio)
-2
-1
0
1 at 2555.011 kb on + strand at 2555.117 kb on + strand at 2555.217 kb on + strand at 2555.316 kb on - strand at 2555.708 kb on + strand at 2555.708 kb on + strand at 2555.716 kb on - strand at 2555.716 kb on - strand at 2555.808 kb on - strand, within DvMF_2059 at 2556.033 kb on + strand, within DvMF_2059 at 2556.051 kb on - strand at 2556.233 kb on - strand at 2556.462 kb on + strand at 2556.470 kb on - strand at 2556.470 kb on - strand at 2556.730 kb on + strand, within DvMF_2060 at 2556.749 kb on + strand, within DvMF_2060 at 2556.773 kb on + strand, within DvMF_2060 at 2556.853 kb on - strand at 2556.903 kb on - strand, within DvMF_2061 at 2556.916 kb on - strand, within DvMF_2061 at 2556.938 kb on + strand, within DvMF_2061 at 2557.011 kb on - strand, within DvMF_2061
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 2,555,011 + -0.2 2,555,117 + +0.0 2,555,217 + -0.5 2,555,316 - -0.9 2,555,708 + -0.7 2,555,708 + +0.0 2,555,716 - -1.3 2,555,716 - +0.0 2,555,808 - DvMF_2059 0.11 -1.5 2,556,033 + DvMF_2059 0.89 -0.8 2,556,051 - -0.2 2,556,233 - -0.2 2,556,462 + -1.0 2,556,470 - -0.9 2,556,470 - -0.5 2,556,730 + DvMF_2060 0.70 -0.3 2,556,749 + DvMF_2060 0.75 -1.9 2,556,773 + DvMF_2060 0.81 -1.0 2,556,853 - +0.0 2,556,903 - DvMF_2061 0.17 -0.6 2,556,916 - DvMF_2061 0.21 -2.5 2,556,938 + DvMF_2061 0.28 -0.9 2,557,011 - DvMF_2061 0.50 -0.9
Or see this region's nucleotide sequence