Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1839 and DvMF_1840 are separated by 329 nucleotides DvMF_1840 and DvMF_1841 are separated by 1 nucleotides DvMF_1841 and DvMF_1842 are separated by 68 nucleotides
DvMF_1839: DvMF_1839 - Methyltransferase type 11 (RefSeq), at 2,248,902 to 2,250,038
_1839
DvMF_1840: DvMF_1840 - CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase (RefSeq), at 2,250,368 to 2,251,525
_1840
DvMF_1841: DvMF_1841 - UDP-N-acetylglucosamine pyrophosphorylase related protein (RefSeq), at 2,251,527 to 2,252,204
_1841
DvMF_1842: DvMF_1842 - glycosyl transferase family 2 (RefSeq), at 2,252,273 to 2,254,927
_1842
Position (kb)
2250
2251
2252 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2249.398 kb on - strand, within DvMF_1839 at 2249.484 kb on + strand, within DvMF_1839 at 2249.484 kb on + strand, within DvMF_1839 at 2249.492 kb on - strand, within DvMF_1839 at 2249.492 kb on - strand, within DvMF_1839 at 2249.750 kb on + strand, within DvMF_1839 at 2249.816 kb on + strand, within DvMF_1839 at 2249.818 kb on - strand, within DvMF_1839 at 2249.828 kb on - strand, within DvMF_1839 at 2249.906 kb on + strand, within DvMF_1839 at 2250.041 kb on - strand at 2250.780 kb on - strand, within DvMF_1840 at 2250.889 kb on + strand, within DvMF_1840 at 2250.960 kb on + strand, within DvMF_1840 at 2251.403 kb on + strand, within DvMF_1840 at 2251.527 kb on - strand at 2251.601 kb on + strand, within DvMF_1841 at 2251.835 kb on - strand, within DvMF_1841 at 2251.837 kb on + strand, within DvMF_1841 at 2252.088 kb on - strand, within DvMF_1841
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 2,249,398 - DvMF_1839 0.44 -0.5 2,249,484 + DvMF_1839 0.51 -1.5 2,249,484 + DvMF_1839 0.51 -0.9 2,249,492 - DvMF_1839 0.52 -1.5 2,249,492 - DvMF_1839 0.52 -0.8 2,249,750 + DvMF_1839 0.75 -0.3 2,249,816 + DvMF_1839 0.80 -3.0 2,249,818 - DvMF_1839 0.81 +0.1 2,249,828 - DvMF_1839 0.81 -1.8 2,249,906 + DvMF_1839 0.88 -0.3 2,250,041 - -1.5 2,250,780 - DvMF_1840 0.36 +0.4 2,250,889 + DvMF_1840 0.45 +0.5 2,250,960 + DvMF_1840 0.51 +0.1 2,251,403 + DvMF_1840 0.89 -0.4 2,251,527 - -0.1 2,251,601 + DvMF_1841 0.11 -0.3 2,251,835 - DvMF_1841 0.45 +0.2 2,251,837 + DvMF_1841 0.46 +0.9 2,252,088 - DvMF_1841 0.83 +0.4
Or see this region's nucleotide sequence