Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1629 and DvMF_1630 are separated by 42 nucleotides DvMF_1630 and DvMF_1631 are separated by 349 nucleotides
DvMF_1629: DvMF_1629 - ABC transporter related (RefSeq), at 2,008,369 to 2,009,316
_1629
DvMF_1630: DvMF_1630 - protein of unknown function DUF214 (RefSeq), at 2,009,359 to 2,010,507
_1630
DvMF_1631: DvMF_1631 - two component transcriptional regulator, winged helix family (RefSeq), at 2,010,857 to 2,011,684
_1631
Position (kb)
2009
2010
2011 Strain fitness (log2 ratio)
-2
-1
0
1 at 2008.428 kb on + strand at 2008.710 kb on + strand, within DvMF_1629 at 2008.723 kb on + strand, within DvMF_1629 at 2008.839 kb on + strand, within DvMF_1629 at 2009.029 kb on - strand, within DvMF_1629 at 2009.063 kb on - strand, within DvMF_1629 at 2009.162 kb on - strand, within DvMF_1629 at 2009.278 kb on - strand at 2009.318 kb on + strand at 2009.326 kb on - strand at 2009.331 kb on - strand at 2009.363 kb on + strand at 2009.434 kb on + strand at 2009.465 kb on - strand at 2009.585 kb on - strand, within DvMF_1630 at 2009.622 kb on - strand, within DvMF_1630 at 2009.863 kb on - strand, within DvMF_1630 at 2009.865 kb on + strand, within DvMF_1630 at 2009.921 kb on + strand, within DvMF_1630 at 2010.724 kb on + strand at 2010.864 kb on + strand at 2010.872 kb on - strand at 2010.872 kb on - strand at 2010.874 kb on + strand at 2010.921 kb on - strand at 2011.028 kb on - strand, within DvMF_1631 at 2011.028 kb on - strand, within DvMF_1631 at 2011.044 kb on + strand, within DvMF_1631 at 2011.208 kb on + strand, within DvMF_1631 at 2011.216 kb on - strand, within DvMF_1631 at 2011.433 kb on + strand, within DvMF_1631 at 2011.473 kb on - strand, within DvMF_1631
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 2,008,428 + -0.7 2,008,710 + DvMF_1629 0.36 -0.0 2,008,723 + DvMF_1629 0.37 -0.5 2,008,839 + DvMF_1629 0.50 -0.5 2,009,029 - DvMF_1629 0.70 -0.6 2,009,063 - DvMF_1629 0.73 -0.1 2,009,162 - DvMF_1629 0.84 -0.6 2,009,278 - -0.5 2,009,318 + -0.8 2,009,326 - +0.7 2,009,331 - -0.7 2,009,363 + -2.4 2,009,434 + -1.4 2,009,465 - +0.6 2,009,585 - DvMF_1630 0.20 -0.8 2,009,622 - DvMF_1630 0.23 +0.2 2,009,863 - DvMF_1630 0.44 -0.0 2,009,865 + DvMF_1630 0.44 -1.1 2,009,921 + DvMF_1630 0.49 +0.5 2,010,724 + +0.1 2,010,864 + +0.5 2,010,872 - -0.6 2,010,872 - -0.6 2,010,874 + +0.1 2,010,921 - -1.1 2,011,028 - DvMF_1631 0.21 -0.3 2,011,028 - DvMF_1631 0.21 -1.0 2,011,044 + DvMF_1631 0.23 -0.5 2,011,208 + DvMF_1631 0.42 -0.3 2,011,216 - DvMF_1631 0.43 -0.8 2,011,433 + DvMF_1631 0.70 -2.0 2,011,473 - DvMF_1631 0.74 +0.1
Or see this region's nucleotide sequence