Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1431 and DvMF_1432 are separated by 360 nucleotides DvMF_1432 and DvMF_1433 are separated by 143 nucleotides
DvMF_1431: DvMF_1431 - radical SAM enzyme, Cfr family (RefSeq), at 1,751,563 to 1,752,666
_1431
DvMF_1432: DvMF_1432 - hypothetical protein (RefSeq), at 1,753,027 to 1,754,031
_1432
DvMF_1433: DvMF_1433 - iron-containing alcohol dehydrogenase (RefSeq), at 1,754,175 to 1,755,470
_1433
Position (kb)
1753
1754
1755 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1752.474 kb on + strand, within DvMF_1431 at 1752.482 kb on - strand, within DvMF_1431 at 1752.482 kb on - strand, within DvMF_1431 at 1752.487 kb on - strand, within DvMF_1431 at 1752.509 kb on - strand, within DvMF_1431 at 1752.634 kb on - strand at 1753.028 kb on - strand at 1753.474 kb on + strand, within DvMF_1432 at 1753.490 kb on - strand, within DvMF_1432 at 1753.629 kb on - strand, within DvMF_1432 at 1753.699 kb on - strand, within DvMF_1432 at 1753.871 kb on - strand, within DvMF_1432 at 1753.917 kb on - strand, within DvMF_1432 at 1754.038 kb on - strand at 1754.141 kb on - strand at 1754.232 kb on + strand at 1754.317 kb on + strand, within DvMF_1433 at 1754.351 kb on + strand, within DvMF_1433 at 1754.400 kb on - strand, within DvMF_1433 at 1754.478 kb on - strand, within DvMF_1433 at 1754.527 kb on - strand, within DvMF_1433 at 1754.527 kb on - strand, within DvMF_1433 at 1754.527 kb on - strand, within DvMF_1433 at 1754.527 kb on - strand, within DvMF_1433 at 1754.530 kb on + strand, within DvMF_1433 at 1754.628 kb on - strand, within DvMF_1433 at 1754.888 kb on - strand, within DvMF_1433
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 1,752,474 + DvMF_1431 0.83 -0.8 1,752,482 - DvMF_1431 0.83 -0.1 1,752,482 - DvMF_1431 0.83 -1.2 1,752,487 - DvMF_1431 0.84 -1.4 1,752,509 - DvMF_1431 0.86 -1.8 1,752,634 - -1.1 1,753,028 - -0.5 1,753,474 + DvMF_1432 0.44 -0.4 1,753,490 - DvMF_1432 0.46 +0.0 1,753,629 - DvMF_1432 0.60 +1.0 1,753,699 - DvMF_1432 0.67 -1.3 1,753,871 - DvMF_1432 0.84 -3.3 1,753,917 - DvMF_1432 0.89 -2.2 1,754,038 - +0.3 1,754,141 - -0.9 1,754,232 + -0.4 1,754,317 + DvMF_1433 0.11 -0.8 1,754,351 + DvMF_1433 0.14 -0.5 1,754,400 - DvMF_1433 0.17 +0.2 1,754,478 - DvMF_1433 0.23 -1.4 1,754,527 - DvMF_1433 0.27 -1.4 1,754,527 - DvMF_1433 0.27 +0.1 1,754,527 - DvMF_1433 0.27 -0.4 1,754,527 - DvMF_1433 0.27 -0.4 1,754,530 + DvMF_1433 0.27 -0.8 1,754,628 - DvMF_1433 0.35 -0.3 1,754,888 - DvMF_1433 0.55 +0.2
Or see this region's nucleotide sequence