Experiment: MoLS4 minimal media
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0545 and DvMF_0546 are separated by 216 nucleotides DvMF_0546 and DvMF_0547 are separated by 401 nucleotides
DvMF_0545: DvMF_0545 - glutamine amidotransferase class-II (RefSeq), at 641,688 to 642,797
_0545
DvMF_0546: DvMF_0546 - Glutamate synthase (NADPH) (RefSeq), at 643,014 to 644,537
_0546
DvMF_0547: DvMF_0547 - putative carboxylesterase (RefSeq), at 644,939 to 645,748
_0547
Position (kb) 643
644
645 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 642.033 kb on - strand, within DvMF_0545 at 642.180 kb on - strand, within DvMF_0545 at 642.588 kb on - strand, within DvMF_0545 at 642.598 kb on + strand, within DvMF_0545 at 642.703 kb on - strand at 643.036 kb on - strand at 643.059 kb on + strand at 643.145 kb on - strand at 643.190 kb on - strand, within DvMF_0546 at 643.352 kb on + strand, within DvMF_0546 at 643.357 kb on + strand, within DvMF_0546 at 643.370 kb on - strand, within DvMF_0546 at 643.416 kb on + strand, within DvMF_0546 at 643.433 kb on - strand, within DvMF_0546 at 643.440 kb on - strand, within DvMF_0546 at 643.633 kb on + strand, within DvMF_0546 at 643.641 kb on - strand, within DvMF_0546 at 643.839 kb on - strand, within DvMF_0546 at 644.399 kb on - strand at 644.424 kb on + strand at 644.541 kb on + strand at 644.610 kb on - strand at 644.661 kb on + strand at 645.050 kb on - strand, within DvMF_0547 at 645.099 kb on + strand, within DvMF_0547 at 645.172 kb on - strand, within DvMF_0547 at 645.196 kb on + strand, within DvMF_0547 at 645.287 kb on + strand, within DvMF_0547 at 645.288 kb on - strand, within DvMF_0547 at 645.430 kb on + strand, within DvMF_0547 at 645.512 kb on - strand, within DvMF_0547
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media remove 642,033 - DvMF_0545 0.31 -0.8 642,180 - DvMF_0545 0.44 -0.7 642,588 - DvMF_0545 0.81 +0.5 642,598 + DvMF_0545 0.82 +0.3 642,703 - -0.2 643,036 - -0.4 643,059 + -0.4 643,145 - -1.3 643,190 - DvMF_0546 0.12 -0.7 643,352 + DvMF_0546 0.22 +0.3 643,357 + DvMF_0546 0.23 +0.0 643,370 - DvMF_0546 0.23 -1.7 643,416 + DvMF_0546 0.26 -1.0 643,433 - DvMF_0546 0.27 +1.0 643,440 - DvMF_0546 0.28 -0.7 643,633 + DvMF_0546 0.41 +0.0 643,641 - DvMF_0546 0.41 +0.2 643,839 - DvMF_0546 0.54 -0.4 644,399 - -0.8 644,424 + -0.3 644,541 + -1.4 644,610 - -0.9 644,661 + -0.6 645,050 - DvMF_0547 0.14 +0.1 645,099 + DvMF_0547 0.20 -3.0 645,172 - DvMF_0547 0.29 -1.7 645,196 + DvMF_0547 0.32 -0.7 645,287 + DvMF_0547 0.43 -1.4 645,288 - DvMF_0547 0.43 -0.4 645,430 + DvMF_0547 0.61 +0.4 645,512 - DvMF_0547 0.71 -0.8
Or see this region's nucleotide sequence