Experiment: Mc formate, casamino free, with 10mM Glycine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS05080 and MMP_RS05085 are separated by 14 nucleotides MMP_RS05085 and MMP_RS05090 are separated by 10 nucleotides
MMP_RS05080: MMP_RS05080 - acetyl-CoA decarbonylase/synthase complex subunit delta, at 966,196 to 967,350
_RS05080
MMP_RS05085: MMP_RS05085 - AAA family ATPase, at 967,365 to 968,117
_RS05085
MMP_RS05090: MMP_RS05090 - CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta, at 968,128 to 969,501
_RS05090
Position (kb) 967
968
969 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 966.505 kb on - strand, within MMP_RS05080 at 966.559 kb on - strand, within MMP_RS05080 at 966.559 kb on - strand, within MMP_RS05080 at 966.560 kb on + strand, within MMP_RS05080 at 966.578 kb on + strand, within MMP_RS05080 at 966.591 kb on - strand, within MMP_RS05080 at 966.622 kb on - strand, within MMP_RS05080 at 966.623 kb on + strand, within MMP_RS05080 at 966.623 kb on + strand, within MMP_RS05080 at 966.864 kb on - strand, within MMP_RS05080 at 966.910 kb on + strand, within MMP_RS05080 at 966.964 kb on - strand, within MMP_RS05080 at 966.964 kb on - strand, within MMP_RS05080 at 966.965 kb on + strand, within MMP_RS05080 at 966.965 kb on + strand, within MMP_RS05080 at 967.021 kb on - strand, within MMP_RS05080 at 967.022 kb on + strand, within MMP_RS05080 at 967.467 kb on + strand, within MMP_RS05085 at 967.483 kb on + strand, within MMP_RS05085 at 967.570 kb on - strand, within MMP_RS05085 at 967.732 kb on + strand, within MMP_RS05085 at 967.741 kb on - strand, within MMP_RS05085 at 967.742 kb on + strand, within MMP_RS05085 at 967.781 kb on - strand, within MMP_RS05085 at 967.795 kb on - strand, within MMP_RS05085 at 967.853 kb on - strand, within MMP_RS05085 at 967.871 kb on - strand, within MMP_RS05085 at 967.892 kb on - strand, within MMP_RS05085 at 967.910 kb on - strand, within MMP_RS05085 at 967.911 kb on + strand, within MMP_RS05085 at 968.129 kb on - strand at 968.130 kb on + strand at 968.297 kb on + strand, within MMP_RS05090 at 968.482 kb on - strand, within MMP_RS05090 at 968.710 kb on - strand, within MMP_RS05090 at 968.901 kb on - strand, within MMP_RS05090 at 968.950 kb on - strand, within MMP_RS05090 at 968.951 kb on + strand, within MMP_RS05090 at 968.986 kb on + strand, within MMP_RS05090 at 969.055 kb on - strand, within MMP_RS05090 at 969.055 kb on - strand, within MMP_RS05090 at 969.056 kb on + strand, within MMP_RS05090
Per-strain Table
Position Strand Gene LocusTag Fraction Mc formate, casamino free, with 10mM Glycine remove 966,505 - MMP_RS05080 0.27 -2.9 966,559 - MMP_RS05080 0.31 -3.2 966,559 - MMP_RS05080 0.31 -3.0 966,560 + MMP_RS05080 0.32 -2.1 966,578 + MMP_RS05080 0.33 -2.1 966,591 - MMP_RS05080 0.34 -1.9 966,622 - MMP_RS05080 0.37 -2.9 966,623 + MMP_RS05080 0.37 -2.0 966,623 + MMP_RS05080 0.37 -2.2 966,864 - MMP_RS05080 0.58 -1.7 966,910 + MMP_RS05080 0.62 -1.8 966,964 - MMP_RS05080 0.66 -2.5 966,964 - MMP_RS05080 0.66 -2.2 966,965 + MMP_RS05080 0.67 -1.7 966,965 + MMP_RS05080 0.67 -2.0 967,021 - MMP_RS05080 0.71 -2.5 967,022 + MMP_RS05080 0.72 -2.3 967,467 + MMP_RS05085 0.14 -1.6 967,483 + MMP_RS05085 0.16 -2.3 967,570 - MMP_RS05085 0.27 -4.1 967,732 + MMP_RS05085 0.49 -2.4 967,741 - MMP_RS05085 0.50 -1.7 967,742 + MMP_RS05085 0.50 -2.4 967,781 - MMP_RS05085 0.55 -2.3 967,795 - MMP_RS05085 0.57 -2.6 967,853 - MMP_RS05085 0.65 -2.4 967,871 - MMP_RS05085 0.67 -2.9 967,892 - MMP_RS05085 0.70 -2.6 967,910 - MMP_RS05085 0.72 -2.9 967,911 + MMP_RS05085 0.73 -3.9 968,129 - -2.9 968,130 + -4.0 968,297 + MMP_RS05090 0.12 -1.5 968,482 - MMP_RS05090 0.26 -3.0 968,710 - MMP_RS05090 0.42 -1.2 968,901 - MMP_RS05090 0.56 -2.7 968,950 - MMP_RS05090 0.60 -3.1 968,951 + MMP_RS05090 0.60 -1.6 968,986 + MMP_RS05090 0.62 -2.3 969,055 - MMP_RS05090 0.67 -0.6 969,055 - MMP_RS05090 0.67 -2.6 969,056 + MMP_RS05090 0.68 -2.5
Or see this region's nucleotide sequence