Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS08570

Experiment: D-Glucose 20 mM (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS08545 and BWI76_RS08550 are separated by 162 nucleotidesBWI76_RS08550 and BWI76_RS08555 are separated by 26 nucleotidesBWI76_RS08555 and BWI76_RS08560 are separated by 3 nucleotidesBWI76_RS08560 and BWI76_RS08565 are separated by 144 nucleotidesBWI76_RS08565 and BWI76_RS08570 are separated by 35 nucleotidesBWI76_RS08570 and BWI76_RS08580 are separated by 456 nucleotides BWI76_RS08545: BWI76_RS08545 - cell division protein CpoB, at 1,808,345 to 1,809,130 _RS08545 BWI76_RS08550: BWI76_RS08550 - tRNA-Lys, at 1,809,293 to 1,809,368 _RS08550 BWI76_RS08555: BWI76_RS08555 - tRNA-Val, at 1,809,395 to 1,809,470 _RS08555 BWI76_RS08560: BWI76_RS08560 - tRNA-Lys, at 1,809,474 to 1,809,549 _RS08560 BWI76_RS08565: BWI76_RS08565 - tRNA-Lys, at 1,809,694 to 1,809,769 _RS08565 BWI76_RS08570: BWI76_RS08570 - tRNA-Lys, at 1,809,805 to 1,809,880 _RS08570 BWI76_RS08580: BWI76_RS08580 - quinolinate synthetase, at 1,810,337 to 1,811,380 _RS08580 Position (kb) 1809 1810Strain fitness (log2 ratio) -3 -2 -1 0 1at 1808.892 kb on - strand, within BWI76_RS08545at 1809.582 kb on + strandat 1810.013 kb on + strandat 1810.288 kb on - strandat 1810.504 kb on - strand, within BWI76_RS08580

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose 20 mM (C)
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1,808,892 - BWI76_RS08545 0.70 -0.0
1,809,582 + +0.2
1,810,013 + +0.0
1,810,288 - -1.2
1,810,504 - BWI76_RS08580 0.16 -3.1

Or see this region's nucleotide sequence