Experiment: MoLS4 minimal media with L-Histidine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_1413 and DvMF_1414 are separated by 102 nucleotides DvMF_1414 and DvMF_1415 are separated by 154 nucleotides DvMF_1415 and DvMF_1416 are separated by 24 nucleotides DvMF_1416 and DvMF_1417 are separated by 51 nucleotides
DvMF_1413: DvMF_1413 - hypothetical protein (RefSeq), at 1,727,449 to 1,728,258
_1413
DvMF_1414: DvMF_1414 - Phosphoglycerate mutase (RefSeq), at 1,728,361 to 1,729,626
_1414
DvMF_1415: DvMF_1415 - hypothetical protein (RefSeq), at 1,729,781 to 1,730,092
_1415
DvMF_1416: DvMF_1416 - hypothetical protein (RefSeq), at 1,730,117 to 1,730,554
_1416
DvMF_1417: DvMF_1417 - heavy metal translocating P-type ATPase (RefSeq), at 1,730,606 to 1,733,521
_1417
Position (kb)
1728
1729
1730 Strain fitness (log2 ratio)
-2
-1
0
1 at 1728.458 kb on + strand at 1728.460 kb on - strand at 1728.466 kb on - strand at 1728.977 kb on - strand, within DvMF_1414 at 1729.166 kb on + strand, within DvMF_1414 at 1729.166 kb on + strand, within DvMF_1414 at 1729.226 kb on + strand, within DvMF_1414 at 1729.285 kb on + strand, within DvMF_1414 at 1729.351 kb on + strand, within DvMF_1414 at 1729.990 kb on + strand, within DvMF_1415 at 1730.094 kb on - strand at 1730.184 kb on + strand, within DvMF_1416 at 1730.499 kb on - strand, within DvMF_1416 at 1730.514 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Histidine remove 1,728,458 + -0.9 1,728,460 - -0.5 1,728,466 - -1.2 1,728,977 - DvMF_1414 0.49 -1.7 1,729,166 + DvMF_1414 0.64 -0.9 1,729,166 + DvMF_1414 0.64 -1.1 1,729,226 + DvMF_1414 0.68 -0.8 1,729,285 + DvMF_1414 0.73 -1.9 1,729,351 + DvMF_1414 0.78 -1.5 1,729,990 + DvMF_1415 0.67 -0.6 1,730,094 - -0.4 1,730,184 + DvMF_1416 0.15 -0.7 1,730,499 - DvMF_1416 0.87 -0.6 1,730,514 + -0.6
Or see this region's nucleotide sequence