Experiment: MoLS4 minimal media with L-Histidine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0589 and DvMF_0590 are separated by 393 nucleotides DvMF_0590 and DvMF_0591 are separated by 313 nucleotides DvMF_0591 and DvMF_0592 are separated by 239 nucleotides
DvMF_0589: DvMF_0589 - glycosyl transferase, group 2 family protein (RefSeq), at 698,216 to 699,343
_0589
DvMF_0590: DvMF_0590 - ATP-dependent protease, putative (RefSeq), at 699,737 to 702,172
_0590
DvMF_0591: DvMF_0591 - hypothetical protein (RefSeq), at 702,486 to 702,674
_0591
DvMF_0592: DvMF_0592 - major facilitator superfamily MFS_1 (RefSeq), at 702,914 to 704,065
_0592
Position (kb) 699
700
701
702
703 Strain fitness (log2 ratio) -1
0
1
2 at 698.932 kb on - strand, within DvMF_0589 at 699.128 kb on + strand, within DvMF_0589 at 699.296 kb on + strand at 699.398 kb on - strand at 699.673 kb on + strand at 699.787 kb on - strand at 699.962 kb on - strand at 699.962 kb on - strand at 699.962 kb on - strand at 700.062 kb on - strand, within DvMF_0590 at 700.122 kb on - strand, within DvMF_0590 at 700.216 kb on + strand, within DvMF_0590 at 700.438 kb on - strand, within DvMF_0590 at 700.475 kb on - strand, within DvMF_0590 at 700.830 kb on - strand, within DvMF_0590 at 700.830 kb on - strand, within DvMF_0590 at 700.896 kb on - strand, within DvMF_0590 at 700.918 kb on - strand, within DvMF_0590 at 701.060 kb on + strand, within DvMF_0590 at 701.082 kb on + strand, within DvMF_0590 at 701.157 kb on - strand, within DvMF_0590 at 701.315 kb on + strand, within DvMF_0590 at 701.332 kb on + strand, within DvMF_0590 at 701.415 kb on + strand, within DvMF_0590 at 702.074 kb on + strand at 702.216 kb on - strand at 702.738 kb on - strand at 702.963 kb on + strand at 702.965 kb on + strand at 703.034 kb on + strand, within DvMF_0592 at 703.050 kb on + strand, within DvMF_0592 at 703.073 kb on - strand, within DvMF_0592 at 703.083 kb on - strand, within DvMF_0592
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Histidine remove 698,932 - DvMF_0589 0.63 -1.1 699,128 + DvMF_0589 0.81 -1.1 699,296 + -0.6 699,398 - -0.7 699,673 + -0.5 699,787 - -0.8 699,962 - -0.2 699,962 - -0.7 699,962 - +0.1 700,062 - DvMF_0590 0.13 +0.3 700,122 - DvMF_0590 0.16 -0.8 700,216 + DvMF_0590 0.20 -0.0 700,438 - DvMF_0590 0.29 -0.3 700,475 - DvMF_0590 0.30 -0.1 700,830 - DvMF_0590 0.45 -1.7 700,830 - DvMF_0590 0.45 +2.0 700,896 - DvMF_0590 0.48 -0.2 700,918 - DvMF_0590 0.48 +0.3 701,060 + DvMF_0590 0.54 -0.5 701,082 + DvMF_0590 0.55 +0.9 701,157 - DvMF_0590 0.58 -0.6 701,315 + DvMF_0590 0.65 -1.3 701,332 + DvMF_0590 0.65 -0.5 701,415 + DvMF_0590 0.69 -0.3 702,074 + -0.8 702,216 - -0.6 702,738 - -0.5 702,963 + +0.2 702,965 + -0.1 703,034 + DvMF_0592 0.10 -0.9 703,050 + DvMF_0592 0.12 +0.5 703,073 - DvMF_0592 0.14 -0.4 703,083 - DvMF_0592 0.15 -0.4
Or see this region's nucleotide sequence