Experiment: MoLS4 minimal media with L-Histidine
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DvMF_0021 and DvMF_0022 are separated by 357 nucleotides DvMF_0022 and DvMF_0023 are separated by 58 nucleotides DvMF_0023 and DvMF_0024 are separated by 81 nucleotides
DvMF_0021: DvMF_0021 - stationary-phase survival protein SurE (RefSeq), at 26,913 to 27,722
_0021
DvMF_0022: DvMF_0022 - metal dependent phosphohydrolase (RefSeq), at 28,080 to 29,165
_0022
DvMF_0023: DvMF_0023 - dTMP kinase (RefSeq), at 29,224 to 29,871
_0023
DvMF_0024: DvMF_0024 - histone deacetylase superfamily (RefSeq), at 29,953 to 31,272
_0024
Position (kb) 28
29
30 Strain fitness (log2 ratio) -2
-1
0
1 at 27.239 kb on - strand, within DvMF_0021 at 27.366 kb on - strand, within DvMF_0021 at 27.522 kb on - strand, within DvMF_0021 at 27.654 kb on - strand at 27.658 kb on + strand at 27.659 kb on - strand at 27.818 kb on - strand at 27.847 kb on - strand at 28.247 kb on - strand, within DvMF_0022 at 28.247 kb on - strand, within DvMF_0022 at 28.255 kb on + strand, within DvMF_0022 at 28.277 kb on + strand, within DvMF_0022 at 28.327 kb on - strand, within DvMF_0022 at 28.338 kb on - strand, within DvMF_0022 at 28.453 kb on - strand, within DvMF_0022 at 28.581 kb on - strand, within DvMF_0022 at 28.790 kb on - strand, within DvMF_0022 at 28.830 kb on - strand, within DvMF_0022 at 28.888 kb on - strand, within DvMF_0022 at 28.907 kb on + strand, within DvMF_0022 at 28.910 kb on - strand, within DvMF_0022 at 28.910 kb on - strand, within DvMF_0022 at 28.943 kb on + strand, within DvMF_0022 at 29.002 kb on - strand, within DvMF_0022 at 29.928 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 minimal media with L-Histidine remove 27,239 - DvMF_0021 0.40 +0.1 27,366 - DvMF_0021 0.56 -1.0 27,522 - DvMF_0021 0.75 -1.7 27,654 - -0.3 27,658 + -0.3 27,659 - +0.6 27,818 - -0.4 27,847 - -0.5 28,247 - DvMF_0022 0.15 -1.1 28,247 - DvMF_0022 0.15 -0.6 28,255 + DvMF_0022 0.16 -1.8 28,277 + DvMF_0022 0.18 -0.5 28,327 - DvMF_0022 0.23 -1.5 28,338 - DvMF_0022 0.24 -0.6 28,453 - DvMF_0022 0.34 +0.6 28,581 - DvMF_0022 0.46 -1.5 28,790 - DvMF_0022 0.65 -0.8 28,830 - DvMF_0022 0.69 -1.6 28,888 - DvMF_0022 0.74 -1.6 28,907 + DvMF_0022 0.76 -0.3 28,910 - DvMF_0022 0.76 -0.7 28,910 - DvMF_0022 0.76 -0.1 28,943 + DvMF_0022 0.79 -0.6 29,002 - DvMF_0022 0.85 -0.6 29,928 + -0.2
Or see this region's nucleotide sequence