Experiment: L-Phenylalanine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4075 and Pf6N2E2_4076 are separated by 268 nucleotides Pf6N2E2_4076 and Pf6N2E2_4077 are separated by 378 nucleotides Pf6N2E2_4077 and Pf6N2E2_4078 are separated by 58 nucleotides
Pf6N2E2_4075 - Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1), at 4,752,543 to 4,753,541
_4075
Pf6N2E2_4076 - L-Proline/Glycine betaine transporter ProP, at 4,753,810 to 4,755,108
_4076
Pf6N2E2_4077 - cytosolic long-chain acyl-CoA thioester hydrolase family protein, at 4,755,487 to 4,755,891
_4077
Pf6N2E2_4078 - Aldose 1-epimerase, at 4,755,950 to 4,756,849
_4078
Position (kb)
4753
4754
4755
4756 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4752.898 kb on - strand, within Pf6N2E2_4075 at 4752.940 kb on + strand, within Pf6N2E2_4075 at 4752.941 kb on - strand, within Pf6N2E2_4075 at 4752.941 kb on - strand, within Pf6N2E2_4075 at 4752.979 kb on + strand, within Pf6N2E2_4075 at 4753.094 kb on + strand, within Pf6N2E2_4075 at 4753.156 kb on - strand, within Pf6N2E2_4075 at 4753.156 kb on - strand, within Pf6N2E2_4075 at 4753.205 kb on - strand, within Pf6N2E2_4075 at 4753.335 kb on + strand, within Pf6N2E2_4075 at 4753.335 kb on + strand, within Pf6N2E2_4075 at 4753.335 kb on + strand, within Pf6N2E2_4075 at 4753.336 kb on - strand, within Pf6N2E2_4075 at 4753.357 kb on + strand, within Pf6N2E2_4075 at 4753.358 kb on - strand, within Pf6N2E2_4075 at 4753.426 kb on - strand, within Pf6N2E2_4075 at 4753.546 kb on + strand at 4753.546 kb on + strand at 4753.547 kb on - strand at 4753.547 kb on - strand at 4753.547 kb on - strand at 4753.559 kb on + strand at 4753.559 kb on + strand at 4753.559 kb on + strand at 4753.560 kb on - strand at 4753.560 kb on - strand at 4753.560 kb on - strand at 4753.569 kb on + strand at 4753.569 kb on + strand at 4753.569 kb on + strand at 4753.570 kb on - strand at 4753.570 kb on - strand at 4753.570 kb on - strand at 4753.570 kb on - strand at 4753.570 kb on - strand at 4753.570 kb on - strand at 4753.582 kb on + strand at 4753.583 kb on - strand at 4753.583 kb on - strand at 4753.588 kb on + strand at 4753.606 kb on + strand at 4753.606 kb on + strand at 4753.606 kb on + strand at 4753.607 kb on - strand at 4753.607 kb on - strand at 4753.617 kb on + strand at 4753.617 kb on + strand at 4753.618 kb on - strand at 4753.618 kb on - strand at 4753.618 kb on - strand at 4753.652 kb on - strand at 4753.652 kb on - strand at 4753.756 kb on + strand at 4753.756 kb on + strand at 4753.757 kb on - strand at 4753.774 kb on + strand at 4753.774 kb on + strand at 4753.811 kb on + strand at 4753.811 kb on + strand at 4753.812 kb on - strand at 4753.812 kb on - strand at 4753.812 kb on - strand at 4753.832 kb on + strand at 4753.841 kb on - strand at 4753.874 kb on + strand at 4753.874 kb on + strand at 4753.874 kb on + strand at 4753.874 kb on + strand at 4753.874 kb on + strand at 4753.875 kb on - strand at 4753.877 kb on + strand at 4753.877 kb on + strand at 4753.878 kb on - strand at 4753.961 kb on + strand, within Pf6N2E2_4076 at 4753.961 kb on + strand, within Pf6N2E2_4076 at 4753.961 kb on + strand, within Pf6N2E2_4076 at 4753.962 kb on - strand, within Pf6N2E2_4076 at 4754.018 kb on + strand, within Pf6N2E2_4076 at 4754.018 kb on + strand, within Pf6N2E2_4076 at 4754.018 kb on + strand, within Pf6N2E2_4076 at 4754.018 kb on + strand, within Pf6N2E2_4076 at 4754.018 kb on + strand, within Pf6N2E2_4076 at 4754.019 kb on - strand, within Pf6N2E2_4076 at 4754.019 kb on - strand, within Pf6N2E2_4076 at 4754.019 kb on - strand, within Pf6N2E2_4076 at 4754.019 kb on - strand, within Pf6N2E2_4076 at 4754.019 kb on - strand, within Pf6N2E2_4076 at 4754.037 kb on + strand, within Pf6N2E2_4076 at 4754.063 kb on + strand, within Pf6N2E2_4076 at 4754.063 kb on + strand, within Pf6N2E2_4076 at 4754.063 kb on + strand, within Pf6N2E2_4076 at 4754.063 kb on + strand, within Pf6N2E2_4076 at 4754.064 kb on - strand, within Pf6N2E2_4076 at 4754.064 kb on - strand, within Pf6N2E2_4076 at 4754.064 kb on - strand, within Pf6N2E2_4076 at 4754.064 kb on - strand, within Pf6N2E2_4076 at 4754.105 kb on + strand, within Pf6N2E2_4076 at 4754.105 kb on + strand, within Pf6N2E2_4076 at 4754.105 kb on + strand, within Pf6N2E2_4076 at 4754.105 kb on + strand, within Pf6N2E2_4076 at 4754.105 kb on + strand, within Pf6N2E2_4076 at 4754.105 kb on + strand, within Pf6N2E2_4076 at 4754.106 kb on - strand, within Pf6N2E2_4076 at 4754.106 kb on - strand, within Pf6N2E2_4076 at 4754.106 kb on - strand, within Pf6N2E2_4076 at 4754.106 kb on - strand, within Pf6N2E2_4076 at 4754.106 kb on - strand, within Pf6N2E2_4076 at 4754.229 kb on + strand, within Pf6N2E2_4076 at 4754.230 kb on - strand, within Pf6N2E2_4076 at 4754.230 kb on - strand, within Pf6N2E2_4076 at 4754.264 kb on + strand, within Pf6N2E2_4076 at 4754.264 kb on + strand, within Pf6N2E2_4076 at 4754.264 kb on + strand, within Pf6N2E2_4076 at 4754.462 kb on + strand, within Pf6N2E2_4076 at 4754.462 kb on + strand, within Pf6N2E2_4076 at 4754.463 kb on - strand, within Pf6N2E2_4076 at 4754.463 kb on - strand, within Pf6N2E2_4076 at 4754.463 kb on - strand, within Pf6N2E2_4076 at 4754.463 kb on - strand, within Pf6N2E2_4076 at 4754.463 kb on - strand, within Pf6N2E2_4076 at 4754.463 kb on - strand, within Pf6N2E2_4076 at 4754.483 kb on - strand, within Pf6N2E2_4076 at 4754.483 kb on - strand, within Pf6N2E2_4076 at 4754.516 kb on + strand, within Pf6N2E2_4076 at 4754.517 kb on - strand, within Pf6N2E2_4076 at 4754.538 kb on + strand, within Pf6N2E2_4076 at 4754.538 kb on + strand, within Pf6N2E2_4076 at 4754.538 kb on + strand, within Pf6N2E2_4076 at 4754.538 kb on + strand, within Pf6N2E2_4076 at 4754.538 kb on + strand, within Pf6N2E2_4076 at 4754.538 kb on + strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.539 kb on - strand, within Pf6N2E2_4076 at 4754.540 kb on + strand, within Pf6N2E2_4076 at 4754.541 kb on - strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.753 kb on + strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.754 kb on - strand, within Pf6N2E2_4076 at 4754.996 kb on + strand at 4754.996 kb on + strand at 4755.041 kb on + strand at 4755.041 kb on + strand at 4755.042 kb on - strand at 4755.124 kb on + strand at 4755.124 kb on + strand at 4755.124 kb on + strand at 4755.124 kb on + strand at 4755.125 kb on - strand at 4755.125 kb on - strand at 4755.125 kb on - strand at 4755.125 kb on - strand at 4755.125 kb on - strand at 4755.125 kb on - strand at 4755.126 kb on + strand at 4755.127 kb on - strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.208 kb on + strand at 4755.209 kb on - strand at 4755.209 kb on - strand at 4755.209 kb on - strand at 4755.209 kb on - strand at 4755.218 kb on + strand at 4755.218 kb on + strand at 4755.261 kb on + strand at 4755.261 kb on + strand at 4755.261 kb on + strand at 4755.262 kb on - strand at 4755.271 kb on + strand at 4755.273 kb on + strand at 4755.273 kb on + strand at 4755.273 kb on + strand at 4755.273 kb on + strand at 4755.274 kb on - strand at 4755.274 kb on - strand at 4755.290 kb on + strand at 4755.290 kb on + strand at 4755.291 kb on - strand at 4755.291 kb on - strand at 4755.291 kb on - strand at 4755.332 kb on + strand at 4755.333 kb on - strand at 4755.335 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.403 kb on + strand at 4755.404 kb on - strand at 4755.451 kb on + strand at 4755.451 kb on + strand at 4755.451 kb on + strand at 4755.451 kb on + strand at 4755.452 kb on - strand at 4755.491 kb on + strand at 4755.492 kb on - strand at 4755.492 kb on - strand at 4755.492 kb on - strand at 4755.724 kb on + strand, within Pf6N2E2_4077 at 4755.726 kb on + strand, within Pf6N2E2_4077 at 4755.727 kb on - strand, within Pf6N2E2_4077 at 4755.955 kb on + strand at 4755.955 kb on + strand at 4755.956 kb on - strand at 4756.061 kb on + strand, within Pf6N2E2_4078 at 4756.061 kb on + strand, within Pf6N2E2_4078 at 4756.061 kb on + strand, within Pf6N2E2_4078 at 4756.061 kb on + strand, within Pf6N2E2_4078 at 4756.062 kb on - strand, within Pf6N2E2_4078 at 4756.062 kb on - strand, within Pf6N2E2_4078 at 4756.062 kb on - strand, within Pf6N2E2_4078
Per-strain Table
Position Strand Gene LocusTag Fraction L-Phenylalanine (N) remove 4,752,898 - Pf6N2E2_4075 0.36 -0.2 4,752,940 + Pf6N2E2_4075 0.40 +0.1 4,752,941 - Pf6N2E2_4075 0.40 +1.3 4,752,941 - Pf6N2E2_4075 0.40 -0.1 4,752,979 + Pf6N2E2_4075 0.44 -1.9 4,753,094 + Pf6N2E2_4075 0.55 +1.2 4,753,156 - Pf6N2E2_4075 0.61 -0.6 4,753,156 - Pf6N2E2_4075 0.61 -0.8 4,753,205 - Pf6N2E2_4075 0.66 -0.9 4,753,335 + Pf6N2E2_4075 0.79 -0.6 4,753,335 + Pf6N2E2_4075 0.79 -0.7 4,753,335 + Pf6N2E2_4075 0.79 -0.7 4,753,336 - Pf6N2E2_4075 0.79 -2.4 4,753,357 + Pf6N2E2_4075 0.81 +1.3 4,753,358 - Pf6N2E2_4075 0.82 -0.2 4,753,426 - Pf6N2E2_4075 0.88 -1.7 4,753,546 + -2.0 4,753,546 + +1.0 4,753,547 - -0.3 4,753,547 - +0.1 4,753,547 - +0.0 4,753,559 + +1.4 4,753,559 + +1.2 4,753,559 + +0.4 4,753,560 - +0.6 4,753,560 - +1.4 4,753,560 - -0.4 4,753,569 + -0.0 4,753,569 + -0.9 4,753,569 + +0.5 4,753,570 - +0.0 4,753,570 - +0.4 4,753,570 - +1.0 4,753,570 - -0.9 4,753,570 - +0.9 4,753,570 - +0.9 4,753,582 + -0.7 4,753,583 - -0.3 4,753,583 - -1.2 4,753,588 + -0.6 4,753,606 + +1.3 4,753,606 + +0.2 4,753,606 + +0.1 4,753,607 - +0.2 4,753,607 - -0.3 4,753,617 + +0.0 4,753,617 + +1.1 4,753,618 - -0.7 4,753,618 - +0.6 4,753,618 - -0.3 4,753,652 - +1.4 4,753,652 - -0.8 4,753,756 + +1.3 4,753,756 + +0.2 4,753,757 - -0.2 4,753,774 + -1.3 4,753,774 + +0.2 4,753,811 + -0.2 4,753,811 + -0.4 4,753,812 - +0.2 4,753,812 - -0.1 4,753,812 - -0.9 4,753,832 + +0.9 4,753,841 - +0.0 4,753,874 + +1.2 4,753,874 + +0.9 4,753,874 + +0.6 4,753,874 + -0.2 4,753,874 + +2.6 4,753,875 - -2.4 4,753,877 + -1.3 4,753,877 + -0.0 4,753,878 - +1.4 4,753,961 + Pf6N2E2_4076 0.12 -1.0 4,753,961 + Pf6N2E2_4076 0.12 +0.0 4,753,961 + Pf6N2E2_4076 0.12 -0.5 4,753,962 - Pf6N2E2_4076 0.12 +0.5 4,754,018 + Pf6N2E2_4076 0.16 +0.1 4,754,018 + Pf6N2E2_4076 0.16 +1.2 4,754,018 + Pf6N2E2_4076 0.16 +0.5 4,754,018 + Pf6N2E2_4076 0.16 -1.0 4,754,018 + Pf6N2E2_4076 0.16 +0.2 4,754,019 - Pf6N2E2_4076 0.16 +0.6 4,754,019 - Pf6N2E2_4076 0.16 +1.4 4,754,019 - Pf6N2E2_4076 0.16 +1.0 4,754,019 - Pf6N2E2_4076 0.16 +1.0 4,754,019 - Pf6N2E2_4076 0.16 +0.4 4,754,037 + Pf6N2E2_4076 0.17 +1.3 4,754,063 + Pf6N2E2_4076 0.19 +0.7 4,754,063 + Pf6N2E2_4076 0.19 +1.4 4,754,063 + Pf6N2E2_4076 0.19 +0.5 4,754,063 + Pf6N2E2_4076 0.19 +1.0 4,754,064 - Pf6N2E2_4076 0.20 +0.1 4,754,064 - Pf6N2E2_4076 0.20 +0.4 4,754,064 - Pf6N2E2_4076 0.20 +0.9 4,754,064 - Pf6N2E2_4076 0.20 +0.5 4,754,105 + Pf6N2E2_4076 0.23 +1.3 4,754,105 + Pf6N2E2_4076 0.23 +0.8 4,754,105 + Pf6N2E2_4076 0.23 -0.4 4,754,105 + Pf6N2E2_4076 0.23 -0.3 4,754,105 + Pf6N2E2_4076 0.23 +0.0 4,754,105 + Pf6N2E2_4076 0.23 +0.8 4,754,106 - Pf6N2E2_4076 0.23 +0.9 4,754,106 - Pf6N2E2_4076 0.23 +0.9 4,754,106 - Pf6N2E2_4076 0.23 +0.5 4,754,106 - Pf6N2E2_4076 0.23 -0.2 4,754,106 - Pf6N2E2_4076 0.23 -0.4 4,754,229 + Pf6N2E2_4076 0.32 +0.2 4,754,230 - Pf6N2E2_4076 0.32 +0.5 4,754,230 - Pf6N2E2_4076 0.32 -0.6 4,754,264 + Pf6N2E2_4076 0.35 +0.7 4,754,264 + Pf6N2E2_4076 0.35 +0.5 4,754,264 + Pf6N2E2_4076 0.35 +0.8 4,754,462 + Pf6N2E2_4076 0.50 -0.1 4,754,462 + Pf6N2E2_4076 0.50 -0.1 4,754,463 - Pf6N2E2_4076 0.50 +1.3 4,754,463 - Pf6N2E2_4076 0.50 +0.4 4,754,463 - Pf6N2E2_4076 0.50 +0.0 4,754,463 - Pf6N2E2_4076 0.50 +0.3 4,754,463 - Pf6N2E2_4076 0.50 +1.2 4,754,463 - Pf6N2E2_4076 0.50 +0.9 4,754,483 - Pf6N2E2_4076 0.52 +0.8 4,754,483 - Pf6N2E2_4076 0.52 +1.0 4,754,516 + Pf6N2E2_4076 0.54 +0.3 4,754,517 - Pf6N2E2_4076 0.54 +0.4 4,754,538 + Pf6N2E2_4076 0.56 +0.9 4,754,538 + Pf6N2E2_4076 0.56 -0.8 4,754,538 + Pf6N2E2_4076 0.56 +0.7 4,754,538 + Pf6N2E2_4076 0.56 +0.7 4,754,538 + Pf6N2E2_4076 0.56 +0.1 4,754,538 + Pf6N2E2_4076 0.56 +0.5 4,754,539 - Pf6N2E2_4076 0.56 +0.6 4,754,539 - Pf6N2E2_4076 0.56 +0.3 4,754,539 - Pf6N2E2_4076 0.56 +0.6 4,754,539 - Pf6N2E2_4076 0.56 +0.3 4,754,539 - Pf6N2E2_4076 0.56 -0.4 4,754,539 - Pf6N2E2_4076 0.56 +0.7 4,754,539 - Pf6N2E2_4076 0.56 +0.8 4,754,539 - Pf6N2E2_4076 0.56 -0.2 4,754,539 - Pf6N2E2_4076 0.56 +0.9 4,754,540 + Pf6N2E2_4076 0.56 -0.8 4,754,541 - Pf6N2E2_4076 0.56 +0.2 4,754,753 + Pf6N2E2_4076 0.73 +0.3 4,754,753 + Pf6N2E2_4076 0.73 +0.7 4,754,753 + Pf6N2E2_4076 0.73 +0.8 4,754,753 + Pf6N2E2_4076 0.73 +0.8 4,754,753 + Pf6N2E2_4076 0.73 +2.2 4,754,753 + Pf6N2E2_4076 0.73 -3.0 4,754,753 + Pf6N2E2_4076 0.73 +0.5 4,754,753 + Pf6N2E2_4076 0.73 +1.3 4,754,753 + Pf6N2E2_4076 0.73 +0.4 4,754,753 + Pf6N2E2_4076 0.73 -0.3 4,754,753 + Pf6N2E2_4076 0.73 +0.5 4,754,754 - Pf6N2E2_4076 0.73 +0.3 4,754,754 - Pf6N2E2_4076 0.73 +0.4 4,754,754 - Pf6N2E2_4076 0.73 +0.1 4,754,754 - Pf6N2E2_4076 0.73 -0.3 4,754,754 - Pf6N2E2_4076 0.73 +0.0 4,754,754 - Pf6N2E2_4076 0.73 +1.3 4,754,754 - Pf6N2E2_4076 0.73 +0.3 4,754,754 - Pf6N2E2_4076 0.73 +0.4 4,754,996 + +0.6 4,754,996 + -0.3 4,755,041 + +0.7 4,755,041 + -0.7 4,755,042 - -0.6 4,755,124 + +0.4 4,755,124 + +0.5 4,755,124 + -1.0 4,755,124 + +0.9 4,755,125 - +0.1 4,755,125 - +0.9 4,755,125 - +0.6 4,755,125 - -1.0 4,755,125 - -1.0 4,755,125 - +0.6 4,755,126 + -0.1 4,755,127 - -1.2 4,755,208 + +1.2 4,755,208 + +1.1 4,755,208 + +0.2 4,755,208 + -1.4 4,755,208 + +1.0 4,755,208 + -0.9 4,755,208 + +0.7 4,755,208 + +1.4 4,755,208 + -0.2 4,755,208 + -0.7 4,755,208 + -1.2 4,755,208 + -1.1 4,755,209 - -0.4 4,755,209 - -0.5 4,755,209 - -1.5 4,755,209 - -1.4 4,755,218 + +0.5 4,755,218 + -1.3 4,755,261 + +1.3 4,755,261 + -0.6 4,755,261 + -0.5 4,755,262 - +1.0 4,755,271 + -0.4 4,755,273 + +0.6 4,755,273 + +0.1 4,755,273 + -0.1 4,755,273 + +0.6 4,755,274 - -2.1 4,755,274 - +0.1 4,755,290 + +0.7 4,755,290 + +0.2 4,755,291 - -1.6 4,755,291 - -0.8 4,755,291 - +0.7 4,755,332 + +0.1 4,755,333 - -0.8 4,755,335 + -0.4 4,755,403 + +0.5 4,755,403 + +1.0 4,755,403 + +0.0 4,755,403 + -0.5 4,755,403 + +0.1 4,755,403 + +0.5 4,755,403 + +0.0 4,755,403 + -0.8 4,755,403 + +0.2 4,755,404 - +0.6 4,755,451 + -1.3 4,755,451 + -0.8 4,755,451 + +0.4 4,755,451 + +0.3 4,755,452 - -1.1 4,755,491 + +0.1 4,755,492 - -0.3 4,755,492 - +0.9 4,755,492 - -0.8 4,755,724 + Pf6N2E2_4077 0.59 -2.0 4,755,726 + Pf6N2E2_4077 0.59 -0.3 4,755,727 - Pf6N2E2_4077 0.59 -2.4 4,755,955 + -0.1 4,755,955 + +1.1 4,755,956 - -0.4 4,756,061 + Pf6N2E2_4078 0.12 -0.6 4,756,061 + Pf6N2E2_4078 0.12 +0.5 4,756,061 + Pf6N2E2_4078 0.12 +0.5 4,756,061 + Pf6N2E2_4078 0.12 -0.1 4,756,062 - Pf6N2E2_4078 0.12 +1.1 4,756,062 - Pf6N2E2_4078 0.12 -0.8 4,756,062 - Pf6N2E2_4078 0.12 +0.1
Or see this region's nucleotide sequence