Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3633 and HP15_3635 are separated by 66 nucleotides HP15_3635 and HP15_3634 are separated by 14 nucleotides HP15_3634 and HP15_3636 are separated by 18 nucleotides
HP15_3633: HP15_3633 - protein-S-isoprenylcysteine methyltransferase, at 3,828,468 to 3,828,869
_3633
HP15_3635: HP15_3635 - conserved hypothetical protein, at 3,828,936 to 3,829,709
_3635
HP15_3634: HP15_3634 - hypothetical protein, at 3,829,724 to 3,829,846
_3634
HP15_3636: HP15_3636 - protein containing molybdopterin oxidoreductase / molybdopterin dinucleotide-binding region, at 3,829,865 to 3,831,976
_3636
Position (kb)
3829
3830 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3828.855 kb on + strand at 3828.858 kb on - strand at 3828.875 kb on - strand at 3828.971 kb on - strand at 3828.971 kb on - strand at 3829.186 kb on - strand, within HP15_3635 at 3829.205 kb on + strand, within HP15_3635 at 3829.253 kb on - strand, within HP15_3635 at 3829.294 kb on + strand, within HP15_3635 at 3829.294 kb on + strand, within HP15_3635 at 3829.302 kb on - strand, within HP15_3635 at 3829.302 kb on - strand, within HP15_3635 at 3829.321 kb on + strand, within HP15_3635 at 3829.329 kb on - strand, within HP15_3635 at 3829.372 kb on + strand, within HP15_3635 at 3829.415 kb on + strand, within HP15_3635 at 3829.454 kb on + strand, within HP15_3635 at 3829.492 kb on + strand, within HP15_3635 at 3829.492 kb on - strand, within HP15_3635 at 3829.545 kb on + strand, within HP15_3635 at 3829.550 kb on + strand, within HP15_3635 at 3829.563 kb on - strand, within HP15_3635 at 3829.563 kb on - strand, within HP15_3635 at 3829.565 kb on + strand, within HP15_3635 at 3829.831 kb on - strand, within HP15_3634 at 3829.833 kb on + strand, within HP15_3634 at 3829.892 kb on - strand at 3829.966 kb on + strand at 3829.981 kb on - strand at 3829.988 kb on - strand at 3830.045 kb on + strand at 3830.088 kb on + strand, within HP15_3636 at 3830.163 kb on + strand, within HP15_3636 at 3830.178 kb on + strand, within HP15_3636 at 3830.178 kb on + strand, within HP15_3636 at 3830.178 kb on + strand, within HP15_3636 at 3830.247 kb on - strand, within HP15_3636 at 3830.271 kb on - strand, within HP15_3636 at 3830.313 kb on + strand, within HP15_3636 at 3830.443 kb on + strand, within HP15_3636 at 3830.483 kb on - strand, within HP15_3636 at 3830.528 kb on - strand, within HP15_3636 at 3830.555 kb on + strand, within HP15_3636 at 3830.566 kb on + strand, within HP15_3636 at 3830.574 kb on + strand, within HP15_3636 at 3830.574 kb on + strand, within HP15_3636 at 3830.580 kb on - strand, within HP15_3636 at 3830.599 kb on - strand, within HP15_3636 at 3830.604 kb on + strand, within HP15_3636 at 3830.612 kb on - strand, within HP15_3636 at 3830.612 kb on - strand, within HP15_3636 at 3830.642 kb on - strand, within HP15_3636
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 3,828,855 + +0.5 3,828,858 - -1.3 3,828,875 - +0.5 3,828,971 - +0.1 3,828,971 - -1.5 3,829,186 - HP15_3635 0.32 +0.5 3,829,205 + HP15_3635 0.35 -0.0 3,829,253 - HP15_3635 0.41 +0.3 3,829,294 + HP15_3635 0.46 +0.0 3,829,294 + HP15_3635 0.46 +0.3 3,829,302 - HP15_3635 0.47 +0.3 3,829,302 - HP15_3635 0.47 +0.3 3,829,321 + HP15_3635 0.50 +0.3 3,829,329 - HP15_3635 0.51 +0.6 3,829,372 + HP15_3635 0.56 -0.0 3,829,415 + HP15_3635 0.62 -1.5 3,829,454 + HP15_3635 0.67 -1.8 3,829,492 + HP15_3635 0.72 -0.1 3,829,492 - HP15_3635 0.72 +0.5 3,829,545 + HP15_3635 0.79 +0.4 3,829,550 + HP15_3635 0.79 -0.0 3,829,563 - HP15_3635 0.81 -0.5 3,829,563 - HP15_3635 0.81 +0.7 3,829,565 + HP15_3635 0.81 -0.2 3,829,831 - HP15_3634 0.87 -1.9 3,829,833 + HP15_3634 0.89 -1.1 3,829,892 - +0.3 3,829,966 + -1.2 3,829,981 - +0.6 3,829,988 - -1.3 3,830,045 + -0.1 3,830,088 + HP15_3636 0.11 -0.1 3,830,163 + HP15_3636 0.14 -2.8 3,830,178 + HP15_3636 0.15 -0.1 3,830,178 + HP15_3636 0.15 -0.2 3,830,178 + HP15_3636 0.15 +0.3 3,830,247 - HP15_3636 0.18 +0.6 3,830,271 - HP15_3636 0.19 +0.4 3,830,313 + HP15_3636 0.21 +0.9 3,830,443 + HP15_3636 0.27 +0.1 3,830,483 - HP15_3636 0.29 +0.2 3,830,528 - HP15_3636 0.31 +0.1 3,830,555 + HP15_3636 0.33 -0.5 3,830,566 + HP15_3636 0.33 +0.6 3,830,574 + HP15_3636 0.34 -2.8 3,830,574 + HP15_3636 0.34 -1.5 3,830,580 - HP15_3636 0.34 -1.0 3,830,599 - HP15_3636 0.35 -1.9 3,830,604 + HP15_3636 0.35 -2.4 3,830,612 - HP15_3636 0.35 -2.0 3,830,612 - HP15_3636 0.35 +0.3 3,830,642 - HP15_3636 0.37 +1.1
Or see this region's nucleotide sequence