Experiment: m.b. Choline chloride 358.1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2983 and HP15_2984 are separated by 454 nucleotides HP15_2984 and HP15_2985 are separated by 207 nucleotides HP15_2985 and HP15_2986 are separated by 12 nucleotides
HP15_2983: HP15_2983 - peptidase, U32 family, at 3,125,559 to 3,126,956
_2983
HP15_2984: HP15_2984 - cysteine desulfurase activator complex subunit SufB, at 3,127,411 to 3,128,883
_2984
HP15_2985: HP15_2985 - FeS assembly ATPase SufC, at 3,129,091 to 3,129,864
_2985
HP15_2986: HP15_2986 - FeS assembly protein SufD, at 3,129,877 to 3,131,163
_2986
Position (kb)
3127
3128
3129 Strain fitness (log2 ratio)
-2
-1
0
1 at 3126.508 kb on + strand, within HP15_2983 at 3126.518 kb on - strand, within HP15_2983 at 3126.593 kb on + strand, within HP15_2983 at 3126.616 kb on - strand, within HP15_2983 at 3126.636 kb on - strand, within HP15_2983 at 3126.652 kb on + strand, within HP15_2983 at 3126.653 kb on - strand, within HP15_2983 at 3126.771 kb on + strand, within HP15_2983 at 3126.802 kb on - strand, within HP15_2983 at 3126.837 kb on + strand at 3126.849 kb on + strand at 3126.920 kb on + strand at 3127.070 kb on + strand at 3127.078 kb on - strand at 3127.078 kb on - strand at 3127.078 kb on - strand at 3127.159 kb on + strand at 3127.448 kb on + strand at 3128.885 kb on + strand at 3128.885 kb on + strand at 3128.900 kb on + strand at 3129.849 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 358.1 mM remove 3,126,508 + HP15_2983 0.68 +0.1 3,126,518 - HP15_2983 0.69 -0.1 3,126,593 + HP15_2983 0.74 +0.1 3,126,616 - HP15_2983 0.76 +0.3 3,126,636 - HP15_2983 0.77 +0.4 3,126,652 + HP15_2983 0.78 -1.8 3,126,653 - HP15_2983 0.78 +0.2 3,126,771 + HP15_2983 0.87 +1.0 3,126,802 - HP15_2983 0.89 -0.0 3,126,837 + -0.1 3,126,849 + -0.7 3,126,920 + -0.4 3,127,070 + -0.0 3,127,078 - -0.2 3,127,078 - -1.0 3,127,078 - +0.4 3,127,159 + -0.4 3,127,448 + +1.4 3,128,885 + -1.6 3,128,885 + -2.1 3,128,900 + +1.0 3,129,849 + +0.2
Or see this region's nucleotide sequence